Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq870 82.4 5e-11 >seq870 Length=43228 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || ||||||||||| ||||| || | | Sbjct 18240 ATGCAGATATTCGTAAAAACCCTTACTGGGAAGACGATCACTCTTGAAGTGGAGGCTTCT 18181 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | || | ||||| || ||| ||||||||||| | ||||| |||||| Sbjct 18180 GATACAATCGAGAACGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAA 18121 Query 23731 CAGCGTTTAATATTTGCCGGCAA 23753 || ||| | || || || || || Sbjct 18120 CAACGTCTCATTTTCGCTGGTAA 18098 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || ||||| |||||||| || || |||||||||||||| ||||| || | Sbjct 18597 AATATGCAAATATTCGTAAAAACCCTTACTGGTAAAACGATCACTCTTGAAGTGGAGGCT 18538 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || | || | ||||| || ||| ||||||||||| | ||||| ||| Sbjct 18537 TCTGATACAATCGATAATGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGAT 18478 Query 23728 CAACAGCGTTTAATATTTGCCGG 23750 ||||| ||| | || || || || Sbjct 18477 CAACAACGTCTCATTTTCGCTGG 18455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338004491829920