Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1187 107 5e-18 seq870 91.5 4e-13 >seq1187 Length=486904 Score = 107 bits (118), Expect = 5e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| |||||||| |||||||| ||||| || || ||||||||||| |||||||| Sbjct 310529 GAAGATTTGTCCATCAGTGATAGAGATTACATTAGTTGGAATATAAGCAGATACATCACC 310588 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAA 4576 ||||| ||||||| ||||| | ||||| || || ||||| |||| Sbjct 310589 AGCTTGAGTTTCGATGACAGGAAGAGCTGTGAGAGAACCACCTCCAA 310635 >seq870 Length=43228 Score = 91.5 bits (100), Expect = 4e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||| || || |||||||| || |||||||| ||||| |||||||| ||||| Sbjct 18098 TTACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTA 18157 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 || || ||||| || || || | ||||| || | ||||||||||| || || Sbjct 18158 GCTTTTACGTTCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTA 18217 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 | ||||||| ||| | ||||| Sbjct 18218 AGGGTTTTTACGAATATCTGCAT 18240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192512253660560