Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1221 109 8e-19 >seq1221 Length=1649993 Score = 109 bits (120), Expect = 8e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 77388 TCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTA 77447 ||||| ||||||||| |||||||| || ||||||||||||| || ||||| |||| Sbjct 883452 TCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCGCTTA 883511 Query 77448 TTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCT 77507 || ||||| | |||||| | |||||| || | | ||| ||||| ||||| || Sbjct 883512 TTTAGATCACGAGCTTCAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCATCCGCC 883571 Query 77508 AATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGA 77567 || |||||||| || | |||||||| || || | |||| ||| |||||| | Sbjct 883572 AACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGTGCTTCTTCA 883631 Query 77568 ATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 | || || || || || || || ||||| || ||||| Sbjct 883632 ACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 883669 Score = 109 bits (120), Expect = 8e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 77388 TCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTA 77447 ||||| ||||||||| |||||||| || ||||||||||||| || ||||| |||| Sbjct 889291 TCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCGCTTA 889232 Query 77448 TTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCT 77507 || ||||| | |||||| | |||||| || | | ||| ||||| ||||| || Sbjct 889231 TTTAGATCACGAGCTTCAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCATCCGCC 889172 Query 77508 AATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGA 77567 || |||||||| || | |||||||| || || | |||| ||| |||||| | Sbjct 889171 AACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGTGCTTCTTCA 889112 Query 77568 ATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 | || || || || || || || ||||| || ||||| Sbjct 889111 ACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 889074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 78759 GTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGT 78818 |||| ||| || || || || || |||||||| ||||| || ||||||||||| ||||| Sbjct 885693 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 885752 Query 78819 TGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACC 78878 || || || | |||||| ||||||| || ||| | || | |||| ||||| || Sbjct 885753 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 885812 Query 78879 CCATTATATAGTCCTTGAATAACTTTC 78905 || || || ||||| ||||||||||| Sbjct 885813 CCTTTGTACAGTCCACGAATAACTTTC 885839 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 78759 GTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGT 78818 |||| ||| || || || || || |||||||| ||||| || ||||||||||| ||||| Sbjct 887050 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 886991 Query 78819 TGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACC 78878 || || || | |||||| ||||||| || ||| | || | |||| ||||| || Sbjct 886990 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 886931 Query 78879 CCATTATATAGTCCTTGAATAACTTTC 78905 || || || ||||| ||||||||||| Sbjct 886930 CCTTTGTACAGTCCACGAATAACTTTC 886904 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 |||| | |||||||| |||||| || || || || || || | | || |||||||||| Sbjct 884615 ACTCGAAAATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTAT 884674 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 | || || ||||||| ||| | ||||| |||||||| || | | |||||| || | || Sbjct 884675 TTCCACCTTGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAAC 884734 Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 | || || || ||||| || | |||||| || Sbjct 884735 CATTTGAAGTACCATTAGT--CTGAAATAAAA 884764 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 78097 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTAT 78156 |||| | |||||||| |||||| || || || || || || | | || |||||||||| Sbjct 888128 ACTCGAAAATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTAT 888069 Query 78157 TACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 78216 | || || ||||||| ||| | ||||| |||||||| || | | |||||| || | || Sbjct 888068 TTCCACCTTGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAAC 888009 Query 78217 CGTTAGATGTTCCATTTGTTCCAGAAATATAA 78248 | || || || ||||| || | |||||| || Sbjct 888008 CATTTGAAGTACCATTAGT--CTGAAATAAAA 887979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694658032633600