Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1221 109 8e-19 >seq1221 Length=1649993 Score = 109 bits (120), Expect = 8e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 75983 TCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 76042 ||||| ||||| ||| || || || ||| ||||||||||||| || ||||| |||| Sbjct 883452 TCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCGCTTA 883511 Query 76043 TTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCT 76102 || ||||| | |||||| || ||| || || | | ||| ||||||||||| || Sbjct 883512 TTTAGATCACGAGCTTCAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCATCCGCC 883571 Query 76103 AGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGA 76162 | |||||||| || | |||||||| || || | |||| ||| |||||| | Sbjct 883572 AACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGTGCTTCTTCA 883631 Query 76163 ATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 | ||||| || || ||||| || ||||| || ||||| Sbjct 883632 ACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 883669 Score = 109 bits (120), Expect = 8e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 75983 TCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTA 76042 ||||| ||||| ||| || || || ||| ||||||||||||| || ||||| |||| Sbjct 889291 TCAGCCAGTTCACAAGATGCTTCCAAGGCAGCGTAATAAATTGTCTCAAAAATTCGCTTA 889232 Query 76043 TTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCT 76102 || ||||| | |||||| || ||| || || | | ||| ||||||||||| || Sbjct 889231 TTTAGATCACGAGCTTCAGGAGATGTAAACGGGTATCGCATAAGCATAAATGCATCCGCC 889172 Query 76103 AGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGA 76162 | |||||||| || | |||||||| || || | |||| ||| |||||| | Sbjct 889171 AACCCCTGAACACCCAATCCAATAGGCCTGTGACGAGTATTTGAACGACGTGCTTCTTCA 889112 Query 76163 ATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 | ||||| || || ||||| || ||||| || ||||| Sbjct 889111 ACTGGGTAGTAGTTGATATCAATTATTTTGTTTAGATT 889074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 |||| ||| || || || || || |||||||||||||| || || ||||| || ||||| Sbjct 885693 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 885752 Query 77414 TGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACT 77473 || || || | |||||| ||||||| || ||| | || | ||||| ||| | |||| Sbjct 885753 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 885812 Query 77474 CCGTTATATAGCCCTTGAATAACTTTC 77500 || || || || || ||||||||||| Sbjct 885813 CCTTTGTACAGTCCACGAATAACTTTC 885839 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 |||| ||| || || || || || |||||||||||||| || || ||||| || ||||| Sbjct 887050 GTTTTCTTATGAAGGTTTGAAACCGCTATTCTAGCAGCAAGTATAGCATAATCTGGATGC 886991 Query 77414 TGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACT 77473 || || || | |||||| ||||||| || ||| | || | ||||| ||| | |||| Sbjct 886990 TGAGTGGTCATTGAAGCTGCTGTTTCTGCAGCCAAATTGTCCAGTTCTACAGTTGAAACT 886931 Query 77474 CCGTTATATAGCCCTTGAATAACTTTC 77500 || || || || || ||||||||||| Sbjct 886930 CCTTTGTACAGTCCACGAATAACTTTC 886904 Score = 95.1 bits (104), Expect = 2e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 75731 CCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 75790 || || ||||| | |||| | || |||||| ||| ||||| || | ||| || |||||| Sbjct 883079 CCGGATAATACGCGTCGACTATAGATATTAGAGGTGTATGGCTCAATAGACTCGTTGTTT 883138 Query 75791 CCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 75845 || | |||||| ||||| |||||||||||||| || || | |||| |||||||| Sbjct 883139 CCAAGAATTTGTGCAGTGGAAGCAGTCGGCATTGGAGCAATTAATAGACTATTTC 883193 Score = 95.1 bits (104), Expect = 2e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 75731 CCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 75790 || || ||||| | |||| | || |||||| ||| ||||| || | ||| || |||||| Sbjct 889664 CCGGATAATACGCGTCGACTATAGATATTAGAGGTGTATGGCTCAATAGACTCGTTGTTT 889605 Query 75791 CCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 75845 || | |||||| ||||| |||||||||||||| || || | |||| |||||||| Sbjct 889604 CCAAGAATTTGTGCAGTGGAAGCAGTCGGCATTGGAGCAATTAATAGACTATTTC 889550 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | |||||||| |||||| || || || || || || | |||| |||||||||| Sbjct 884615 ACTCGAAAATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTAT 884674 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || || ||||||| ||| | || || |||||||| || | | |||||| || | | Sbjct 884675 TTCCACCTTGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAAC 884734 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 | || || |||||||| || | |||||| || Sbjct 884735 CATTTGAAGTACCATTAGT--CTGAAATAAAA 884764 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| || || ||||| || ||||| |||||||| || | ||||| | ||||| Sbjct 885064 AGTTCCAGCGTTGAACAAAGTTGGAGAAGCATGAGTAAAGAACCTTTCACTCATGAGATT 885123 Query 77053 GTATGTTTCAATAACTGCT-TCTATATCCCATTGATGAATTCCTACAGCGACACGCATCA 77111 || |||||||| | ||| || |||||| | ||| || || |||||||| ||||||| Sbjct 885124 ATAAGTTTCAATTGC-GCTGTCAATATCCTCTCCATGTATACCAACAGCGACTCGCATCA 885182 Query 77112 ACATATGCTGAGGTCGTTCTAC 77133 |||| || || || |||||||| Sbjct 885183 ACATTTGTTGGGGACGTTCTAC 885204 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| || || ||||| || ||||| |||||||| || | ||||| | ||||| Sbjct 887679 AGTTCCAGCGTTGAACAAAGTTGGAGAAGCATGAGTAAAGAACCTTTCACTCATGAGATT 887620 Query 77053 GTATGTTTCAATAACTGCT-TCTATATCCCATTGATGAATTCCTACAGCGACACGCATCA 77111 || |||||||| | ||| || |||||| | ||| || || |||||||| ||||||| Sbjct 887619 ATAAGTTTCAATTGC-GCTGTCAATATCCTCTCCATGTATACCAACAGCGACTCGCATCA 887561 Query 77112 ACATATGCTGAGGTCGTTCTAC 77133 |||| || || || |||||||| Sbjct 887560 ACATTTGTTGGGGACGTTCTAC 887539 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 76692 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTAT 76751 |||| | |||||||| |||||| || || || || || || | |||| |||||||||| Sbjct 888128 ACTCGAAAATATCAGCATGCCAAGGCTCGAGGTAAATAGCGAAGGCACCTGGTCGTTTAT 888069 Query 76752 TACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGC 76811 | || || ||||||| ||| | || || |||||||| || | | |||||| || | | Sbjct 888068 TTCCACCTTGATCTACATAGCGAGCGGTATTATTATATACACGTAGCATTGGTATTAAAC 888009 Query 76812 CGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 | || || |||||||| || | |||||| || Sbjct 888008 CATTTGAAGTACCATTAGT--CTGAAATAAAA 887979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712923349516800