Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq266 297 5e-76 >seq266 Length=2946 Score = 297 bits (328), Expect = 5e-76 Identities = 430/596 (72%), Gaps = 12/596 (2%) Strand=Plus/Plus Query 920 TCCGGACACGGTATCGGTAAATCAGCGTTTATCTCGATGCTGATCAACTGGGGCATGTCC 979 || || ||||| ||||| || || ||| | | ||||||||||||| |||| | | | Sbjct 1391 TCGGGCCACGGCATCGGCAAGTCCGCGCTGGTGGCGATGCTGATCAAGTGGGCCTTCGAC 1450 Query 980 ACCTGCGAGGACTGCAAGGTAGTGGTCACCGCGAACACCGACAATCAGTTGCGTACAAAA 1039 || | ||| ||| | | |||||||| || ||||||||||| ||| |||| || || Sbjct 1451 ACGTTCGAAGACACCCGCGGCGTGGTCACGGCCAACACCGACAACCAGCTGCGCACGAAG 1510 Query 1040 ACATGGCCTGAAATCATCAAGTGGT-CGAACCTTGCTATCACGAAAGAGTGGTTTAC-CT 1097 || ||| | || | |||||| || || | || || || ||| || || Sbjct 1511 ACCTGGGCCGAGCTGTCGAAGTGGCACGGGTTCAGCC-TGACCAAGGACTGGGCCACGCT 1569 Query 1098 GCACCGCCACAGCGATGTACAGCAACGATCCGGGACACGATAA-ACGCTGGCGCGCTGAC 1156 | |||||||| ||| || |||||||| ||||| ||||| || ||| |||||| || Sbjct 1570 G-ACCGCCACCGCGCTGATCAGCAACGCCCCGGGCCACGACAAGACG-TGGCGCATCGAT 1627 Query 1157 GCTATTCCATGGTCTGAGCACAACACTGAAGCATTCGCCGGGCTGCACAACGAGCGCAAG 1216 || | || ||||| || ||||||| || || ||||| || |||||||||||| || | Sbjct 1628 GCGGTGCCGTGGTCGCAGAACAACACCGAGGCCTTCGCGGGCCTGCACAACGAGGGCCGG 1687 Query 1217 CGCATCATCGTGGTATTCGACGAAGCCTCAAACATTGCCGATCTGGTGTGGGAGGTTGCC 1276 |||||| | |||| |||||||| ||||| ||| ||||| ||| ||||| || ||| Sbjct 1688 CGCATCCTGCTGGTGTTCGACGAGGCCTCGGCCATCGCCGACAAGGTCTGGGAAGTGGCC 1747 Query 1277 GAGGGTGCGCTGACGGACGAGGACACCGAAATCATCTGGGTGGCGTTCGGTAACCCGACG 1336 ||||| |||||||| ||| ||| |||||| ||||||||| |||||||| ||| | || Sbjct 1748 GAGGGAGCGCTGACCGACCAGGGCACCGAGATCATCTGGACCGCGTTCGGCAACACCACC 1807 Query 1337 CGTAACACCGGGCGTTTCCGCGAGTGCTTCCGCAAATACCGGCATCGCTGGAAGTGCGCG 1396 || |||||||| || |||||||||||||||||| | | | ||||| | || | Sbjct 1808 CGCAACACCGGCCGGTTCCGCGAGTGCTTCCGCCGGTTCAAGGCCAGCTGGGACACCGAG 1867 Query 1397 CAGATTGACAGCCGCACCGTTGAGGGCACCAACAAAGAGCAACTGCAAAAGTG---GGTG 1453 ||||| |||||||||||||||||||| ||| | || || || | |||| Sbjct 1868 CAGATCGACAGCCGCACCGTTGAGGGTGTGAACCTGGTCGAA--GC-CGAGCGCATGGTG 1924 Query 1454 GACGACTACGGCGAAGACAGCGACTTCGTGAAGGTGCGTGTACGCGGCATCTTCCC 1509 |||||||||||| ||||||||| | |||||||| ||| | |||||| | ||||| Sbjct 1925 CGCGACTACGGCGAGGACAGCGACGTGGTGAAGGTTCGTATCCGCGGCCTGTTCCC 1980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133508434059360