Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq870 127 4e-24 seq971 111 3e-19 seq823 109 1e-18 seq1149 91.5 3e-13 >seq870 Length=43228 Score = 127 bits (140), Expect = 4e-24 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || || || | ||||||||| ||| |||||| || || |||||||| ||||| Sbjct 18098 TTACCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTA 18157 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||||||| | ||||| || || ||||| || ||||| |||||||||||||| || || Sbjct 18158 GCTTTTACGTTCTCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTCTTCCCAGTA 18217 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 | || || |||||||||||||| Sbjct 18218 AGGGTTTTTACGAATATCTGCAT 18240 Score = 123 bits (136), Expect = 5e-23 Identities = 115/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || || || | ||||||||| ||| |||||| || || |||||||| ||||| ||| Sbjct 18455 CCAGCGAAAATGAGACGTTGTTGATCAGGCGGAATTCCTTCTTTGTCTTGAATCTTAGCT 18514 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||||| ||||||| || || ||||| || ||||| ||||||||||| ||||| || | Sbjct 18515 TTTACATTATCGATTGTATCAGAAGCCTCCACTTCAAGAGTGATCGTTTTACCAGTAAGG 18574 Query 283080 GTCTTAACGAATATCTGCATTTTCAT 283105 || || |||||||| ||||| || || Sbjct 18575 GTTTTTACGAATATTTGCATATTTAT 18600 >seq971 Length=50814 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| |||| ||| || || ||| || || |||||||| || |||||||| ||| Sbjct 50507 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 50448 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||||| | || |||||||| || ||||| || || ||||||||||| || || || | Sbjct 50447 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 50388 Query 283080 GTCTTAACGAATATCTGCATT 283100 ||||| ||||||| |||||| Sbjct 50387 GTCTTTACGAATACTTGCATT 50367 >seq823 Length=9300 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| |||| ||| || || ||| || || |||||||| || |||||||| ||| Sbjct 8194 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8253 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||||| | || |||||||| || ||||| || || ||||||||||| || || || | Sbjct 8254 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8313 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| || ||||| Sbjct 8314 GTCTTTACGAAGATTTGCAT 8333 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| |||| ||| || || ||| || || |||||||| || |||||||| ||| Sbjct 8508 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8567 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||||| | || |||||||| || ||||| || || ||||||||||| || || || | Sbjct 8568 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8627 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| || ||||| Sbjct 8628 GTCTTTACGAAGATTTGCAT 8647 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| |||| ||| || || ||| || || |||||||| || |||||||| ||| Sbjct 8821 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 8880 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||||| | || |||||||| || ||||| || || ||||||||||| || || || | Sbjct 8881 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 8940 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| || ||||| Sbjct 8941 GTCTTTACGAAGATTTGCAT 8960 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||| |||| ||| || || ||| || || |||||||| || |||||||| ||| Sbjct 9135 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTCGCT 9194 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 ||||| | || |||||||| || ||||| || || ||||||||||| || || || | Sbjct 9195 TTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAGC 9254 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| || ||||| Sbjct 9255 GTCTTTACGAAGATTTGCAT 9274 >seq1149 Length=232818 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || |||||||||| ||| ||||| ||| ||||| || || || ||||||||||| ||| Sbjct 43488 CCTGCAAAGATCAGACGCTGTTGATCAGGAGGAATGCCTTCTTTATCTTGGATCTTAGCT 43429 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | |||||||| || | || || || || || || |||||||| || | | Sbjct 43428 TTAACATTTTCGATAGTATCAATGGGCTCTACCTCAAGGGTAATAGTCTTACCAGTGAGA 43369 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| || || || ||||| Sbjct 43368 GTCTTCACAAAAATTTGCAT 43349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046722569930960