Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq823 96.9 2e-15 seq971 86.0 5e-12 >seq823 Length=9300 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| |||| |||||||||||| | || | || ||||| ||| |||||| || Sbjct 8194 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC-GC 8252 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || ||||||| || ||| ||||| | || ||||| || || ||||| Sbjct 8253 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 8312 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||| Sbjct 8313 CGTCTTTACGAAGATTTGCATG 8334 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| |||| |||||||||||| | || | || ||||| ||| |||||| || Sbjct 8508 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC-GC 8566 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || ||||||| || ||| ||||| | || ||||| || || ||||| Sbjct 8567 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 8626 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||| Sbjct 8627 CGTCTTTACGAAGATTTGCATG 8648 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| |||| |||||||||||| | || | || ||||| ||| |||||| || Sbjct 8821 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC-GC 8879 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || ||||||| || ||| ||||| | || ||||| || || ||||| Sbjct 8880 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 8939 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||| Sbjct 8940 CGTCTTTACGAAGATTTGCATG 8961 Score = 96.9 bits (106), Expect = 2e-15 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| |||| |||||||||||| | || | || ||||| ||| |||||| || Sbjct 9135 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC-GC 9193 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || ||||||| || ||| ||||| | || ||||| || || ||||| Sbjct 9194 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 9253 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| ||||||||||||||| Sbjct 9254 CGTCTTTACGAAGATTTGCATG 9275 >seq971 Length=50814 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| |||| |||||||||||| | || | || ||||| ||| |||||| || Sbjct 50507 CCAGCAAAAATCAGACGCTGCTGATCAGGTGGGATTCCCTCCTTATCCTGGATCTTC-GC 50449 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || ||||||| || ||| ||||| | || ||||| || || ||||| Sbjct 50448 TTTTACATTCTCAATAGTGTCGGAGGCTTCAACCTCAAGAGTGATCGTTTTGCCGGTGAG 50389 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| | |||||| Sbjct 50388 CGTCTTTACGAATACTTGCAT 50368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359984959645080