Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heterorhabditis_20bacteriophora_20[genbank_20GCA_5F000223415.1_20201 1-08-22] 1,240 sequences; 76,974,349 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq870 104 6e-17 seq823 104 6e-17 seq971 98.7 2e-15 >seq870 Length=43228 Score = 104 bits (114), Expect = 6e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| || || || || |||||||| || || ||||| || || Sbjct 18237 CAGATATTCGTAAAAACCCTTACTGGGAAGACGATCACTCTTGAAGTGGAGGCTTCTGAT 18178 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||||||||| ||| |||||||| |||||||||||||| || || || || ||| Sbjct 18177 ACAATCGAGAACGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAACAA 18118 Query 178044 CGACTTATCTTCGCCGGAAA 178063 || || || ||||| || || Sbjct 18117 CGTCTCATTTTCGCTGGTAA 18098 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| ||||| || || || ||||||||||| || || ||||| || || Sbjct 18591 CAAATATTCGTAAAAACCCTTACTGGTAAAACGATCACTCTTGAAGTGGAGGCTTCTGAT 18532 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| |||||||| |||||||||||||| || || || || ||| Sbjct 18531 ACAATCGATAATGTAAAAGCTAAGATTCAAGACAAAGAAGGAATTCCGCCTGATCAACAA 18472 Query 178044 CGACTTATCTTCGCCGG 178060 || || || ||||| || Sbjct 18471 CGTCTCATTTTCGCTGG 18455 >seq823 Length=9300 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || ||||||||||| || ||||| ||| ||| ||| Sbjct 8330 CAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCCGAC 8271 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| ||||| || || |||||||| || || ||||| Sbjct 8270 ACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAGCAG 8211 Query 178044 CGACTTATCTTCGCCGG 178060 || || || || || || Sbjct 8210 CGTCTGATTTTTGCTGG 8194 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || ||||||||||| || ||||| ||| ||| ||| Sbjct 8644 CAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCCGAC 8585 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| ||||| || || |||||||| || || ||||| Sbjct 8584 ACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAGCAG 8525 Query 178044 CGACTTATCTTCGCCGG 178060 || || || || || || Sbjct 8524 CGTCTGATTTTTGCTGG 8508 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || ||||||||||| || ||||| ||| ||| ||| Sbjct 8957 CAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCCGAC 8898 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| ||||| || || |||||||| || || ||||| Sbjct 8897 ACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAGCAG 8838 Query 178044 CGACTTATCTTCGCCGG 178060 || || || || || || Sbjct 8837 CGTCTGATTTTTGCTGG 8821 Score = 104 bits (114), Expect = 6e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || ||||||||||| || ||||| ||| ||| ||| Sbjct 9271 CAAATCTTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCCGAC 9212 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| ||||| || || |||||||| || || ||||| Sbjct 9211 ACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAGCAG 9152 Query 178044 CGACTTATCTTCGCCGG 178060 || || || || || || Sbjct 9151 CGTCTGATTTTTGCTGG 9135 >seq971 Length=50814 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||| | ||||| || || ||||| || ||||||||||| || ||||| ||| ||| ||| Sbjct 50371 CAAGTATTCGTAAAGACGCTCACCGGCAAAACGATCACTCTTGAGGTTGAAGCCTCCGAC 50430 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| ||||| ||||| || || |||||||| || || ||||| Sbjct 50431 ACTATTGAGAATGTAAAAGCGAAGATCCAGGATAAGGAGGGAATCCCACCTGATCAGCAG 50490 Query 178044 CGACTTATCTTCGCCGG 178060 || || || || || || Sbjct 50491 CGTCTGATTTTTGCTGG 50507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203712075720560