Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq37 86.0 1e-11 seq653 84.2 5e-11 >seq37 Length=385750 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 ||||| |||||||||||| ||||||| ||||| |||||| | ||||||| ||||| || Sbjct 299758 CAAGCCTCAACATCTGAATTGTATGGTAAAGTACAAGAAGTGCCTCAAAAAGAAACCACA 299817 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGT 61175 || || ||||||||| || |||||| Sbjct 299818 CCCTTCTATCCTCGTTCACCTTATGGT 299844 >seq653 Length=21395 Score = 84.2 bits (92), Expect = 5e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 |||||||||| |||||||| ||||||||||||||| ||||||||||||||| |||||| Sbjct 11475 CTAGCTCAGTTGGTAGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCACG 11534 Query 165776 ATGGGC 165781 |||| Sbjct 11535 GAGGGC 11540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057745878375320