Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 6e-11 >seq6 Length=901872 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 102057 TCCAC-TGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGT 102115 ||||| ||||| ||||| |||||||| | |||||||||| || || | || ||| | Sbjct 887502 TCCACCTGAAAGCCATAAACAGGTCCTAAATCTCCTTCAGATCGATCGTTGAAGCCACAT 887561 Query 102116 TTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGC 102175 | || | ||| || ||| ||||| ||||||||||| || || | |||| Sbjct 887562 TGGTCAAGGAATTGTCGAGACCCATTGGCATCCCAAATCCTGACACCTTTCTCAGATAAA 887621 Query 102176 T-CTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCA 102234 | |||||| | ||| ||||| || ||||| |||||||| || ||||||||| |||| Sbjct 887622 TGCTTTGC-ATTTGTATCTCCTCGAATGAACCATAACAGTTCCTCGACAACACCTTTCCA 887680 Query 102235 AAATACTCTCTTAGTAGTTAAAAGTGGAA 102263 | |||| || || || || | |||| Sbjct 887681 GTAGACTCGTTTGGTTGTCAATACCGGAA 887709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361225822554764