Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 >seq2 Length=1259180 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||| || |||||||| |||||||| || |||| | ||| | ||||| Sbjct 897876 AGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCC 897935 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || ||||||||||| ||| || | |||||||||||| Sbjct 897936 TCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCT 897995 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||| ||| ||| || | ||| |||||| | ||| ||||| || |||||| Sbjct 897996 TGGATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTC 898055 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || || || || ||||| || || ||||||||| Sbjct 898056 TTACCCGTCAAAGTTTTTACGAAAATTTGCATT 898088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||| || |||||||| |||||||| || |||| | ||| | ||||| Sbjct 896844 AGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCC 896903 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || ||||||||||| ||| || | |||||||||||| Sbjct 896904 TCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCT 896963 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATC 21115 || ||||| || || | ||| |||||| Sbjct 896964 TGGA--TTTTGCTTGACATTCTCGATAGTATC 896993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422229536819024