Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 113 5e-20 >seq2 Length=1259180 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||||||||| | ||||| || ||||| || | || || || || | Sbjct 898088 AATGCAAATTTTCGTAAAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTC 898029 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||||| | ||||| || ||||| || |||| || Sbjct 898028 GGATACTATCGAGAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATTCCACCGGATCA 897969 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| |||| || || || |||||||| |||| || ||| | || ||||| Sbjct 897968 GCAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACAA 897909 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | ||||||||||| || Sbjct 897908 CATTCAGAAGGAGTCGACGCTGCATCTGGT 897879 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 ||||| | ||||| || ||||| || |||| ||||| |||| |||| || || || Sbjct 896971 AAAATCCAAGACAAGGAAGGCATTCCACCGGATCAGCAGAGACTGATCTTTGCTGGAAAG 896912 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 |||||||| |||| || ||| | || |||||||| ||||||||| | ||||||||| Sbjct 896911 CAGCTGGAGGACGGTCGTACCTTATCGGATTACAACATTCAGAAGGAGTCGACGCTGCAT 896852 Query 40894 CTAGT 40898 || || Sbjct 896851 CTGGT 896847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515182078456640