Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq7 82.4 7e-11 >seq2 Length=1259180 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || |||||||||||||| | || || ||||| ||||| |||||| Sbjct 897891 GTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCCAGCTGCTTTCCA 897950 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | ||||||||| || || ||||| ||||||||| |||||| ||| Sbjct 897951 GCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGGATTTTTGCTTTG 898010 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| || |||| ||| || || | || | || || || |||| |||| Sbjct 898011 ACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTACCCGTCAAAGTT 898070 Query 118722 TTTACAAAAATCTGCAT 118738 ||||| ||||| ||||| Sbjct 898071 TTTACGAAAATTTGCAT 898087 >seq7 Length=791039 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 45207 AGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAA 45266 ||||||||||| | || || ||||| || || ||| | ||| ||| | || | ||||| Sbjct 96767 AGATGTACTATTCGGATAATCCATTTGATTTCATGGAGCGTATATCGATCGAAGCCAAAA 96826 Query 45267 CTAAtttttttGAGAAACGCGTCGGCGAATACAAG 45301 ||||||||||||| ||||| ||| |||||||| || Sbjct 96827 CTAATTTTTTTGAAAAACGTGTCAGCGAATACCAG 96861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433799923956688