Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=1259180 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGT-CGTTCAGTTGGCGATCGTCGTC 45186 |||| |||||||| |||||||||||||||||| | || | || | ||| |||| || Sbjct 897879 ACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGT-ACGACCGTCCTC 897937 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 ||| || ||||| || || |||| | ||| || || || || | || |||||||| Sbjct 897938 CAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTG 897997 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 |||||| || || | | | | ||| | |||| || |||| || || ||||| Sbjct 897998 GATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTT 898057 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||||| ||| || || || |||||||| Sbjct 898058 ACCCGTCAAAGTTTTTACGAAAATTTGCAT 898087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395047446461044