Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 105 6e-18 seq7 93.3 4e-14 seq13 84.2 2e-11 >seq2 Length=1259180 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| ||| |||| || || || || || | || || || | || Sbjct 898087 ATGCAAATTTTCGTAAAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTCG 898028 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | |||||| | ||| |||||||||||| | || || || ||| Sbjct 898027 GATACTATCGAGAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATTCCACCGGATCAG 897968 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| || ||| |||| ||| | || | ||||| ||| Sbjct 897967 CAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACAAC 897908 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || || ||||| || |||||||| ||| Sbjct 897907 ATTCAGAAGGAGTCGACGCTGCATCTGGTTCTT 897875 >seq7 Length=791039 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 ||| |||||||| || || |||||||| |||||||||||| |||| || ||||| |||| Sbjct 95904 AGGAATATTCTTCTCTGGAAGCTTTGCTGCAATATTTTGGTTGAAAAAGCGCGGTTTGAT 95963 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 ||| || ||||| |||||||||| |||| || | || |||| Sbjct 95964 GCCTGGTTTGACGCATAGCAACGAGCTGATTTCAAGAGATGAGG 96007 >seq13 Length=582103 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| | ||||| |||||||||||| | || || ||| || Sbjct 196451 AAGATGCAGATATTCGTGAAGACATTAACAGGAAAAACGATCACCCTTGAGGTAGAATCG 196510 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | | || | || ||| | ||| ||| || |||||| | ||||| ||| Sbjct 196511 TCTGACACTATTGAGAATGTGAAAGCTAAAATTCAGGATAAAGAAGGCATTCCGCCTGAC 196570 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAA 31335 || ||||| || || || || || || Sbjct 196571 CAACAGCGACTTATTTTTGCAGGTAA 196596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445734282530880