Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq64 84.2 3e-11 seq7 84.2 3e-11 >seq64 Length=281649 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 65547 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606 ||||| || || || || | || ||||||||||| || || || | ||||||||||||| Sbjct 111796 AGAATGAAGGCATCAGCCAGGCCCTGAACACCAATGCCAATCGGACGATGTCTCTTATTA 111737 Query 65607 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 65666 || ||| ||||| || | ||||||||||| ||| || | || || | ||| || Sbjct 111736 GACCGTTCTGCTTCCGGTACTGGATAATAATTGCGATCGATGACCTTGTTCAAATTCCTA 111677 Query 65667 ACAATTACTTT 65677 |||| |||||| Sbjct 111676 ACAACTACTTT 111666 >seq7 Length=791039 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925 ||| |||||||| | ||||||||||| |||||||||||||| |||| | |||||| Sbjct 96864 TTTCTGGTATTCGCTGACACGTTTTTCAAAAAAATTAGTTTTGGCTTCGATCGATATACG 96805 Query 35926 TTCCATGAAATCGAATGGATT 35946 ||||||||||| |||||||| Sbjct 96804 CTCCATGAAATCAAATGGATT 96784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658125378649760