Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=1259180 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | |||||||| || || ||||| |||| |||| || || || ||||| Sbjct 897896 CTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAA 897955 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||| || ||| ||||| | || | ||||| || || ||| ||||||| | Sbjct 897956 GATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGGATTTTTGCTTTGACATT 898015 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | || || |||||| || || | ||||| || || || || | |||||| || Sbjct 898016 CTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTACCCGTCAAAGTTTTTAC 898075 Query 43098 AAAAATTTGCATT 43110 |||||||||||| Sbjct 898076 GAAAATTTGCATT 898088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381342809262312