Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 4e-13 >seq2 Length=1259180 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| |||||||||||||| | || || |||||||||||||||| || | | Sbjct 897896 CTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAA 897955 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGC-TTGATAG 48653 || | | |||||||||| || | | ||||||||| ||||| ||| |||| | Sbjct 897956 GATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGGATTTT-TGCTTTGACAT 898014 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | | || ||||| | || ||| || | |||||||| ||||| || | |||||| | Sbjct 898015 TCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTACCCGTCAAAGTTTTTA 898074 Query 48714 CAAAAATCTGCAT 48726 | ||||| ||||| Sbjct 898075 CGAAAATTTGCAT 898087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421221607629764