Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq13 116 6e-22 seq105 102 1e-17 >seq13 Length=582103 Score = 116 bits (128), Expect = 6e-22 Identities = 186/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || || || ||||| | | | | || || || |||||||| || || || || ||||| Sbjct 299703 GCGAAACGACATCGTAAAGTTTTGCGCGACAATATCCAAGGGATTACGAAACCGGCTATT 299762 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || | || | ||||| || || || ||| | || |||||| | ||||| |||| Sbjct 299763 CGACGATTAGCGAGACGTGGCGGTGTGAAACGTATTTCGGGATTGATTTATGAGGAGACG 299822 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | || | || || | | ||||| | ||||||| | ||| || Sbjct 299823 CGTGGTGTACTAAAAGTATTTCTGGAAAATGTTATACGTGATGCTGTTACTTATTGTGAA 299882 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || ||||| ||||| || || | |||||| | |||||||| |||| |||||||| Sbjct 299883 CATGCGAAACGGAAGACGGTGACAGCAATGGATGTTGTCTATGCTCTGAAGCGTCAAGGA 299942 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | ||||||||||| ||||| Sbjct 299943 CGTACTCTGTATGGTTTTGGCGGTTAA 299969 >seq105 Length=200186 Score = 102 bits (112), Expect = 1e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||||| | || || |||||||| ||||| || || ||||| ||||| Sbjct 40745 GCTAAGCGTCATCGCAAAGTCCTACGTGATAACATTCAAGGTATAACAAAGCCGGCTATT 40686 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 |||||| |||| ||||||||||| || ||||| | || || || | |||||||| Sbjct 40685 CGTCGTTTGGCACGTCGTGGTGGTGTGAAGCGGATTTCAGGTCTGATTTATGAAGA 40630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79069929934452