Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq67 87.8 2e-12 seq2 87.8 2e-12 >seq67 Length=267328 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || ||||||||||| || ||||||| | || ||||| || Sbjct 75190 ATGCAAATTTTCGTCAAGACATTAACTGGTAAGACGATTACACTTGAGGTCGAATCCTCG 75131 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || ||| | || ||| |||||| |||||||| ||||||||||| ||||| Sbjct 75130 GATACAATTGAGAATGTAAAAGCTAAGATTCAGGACAAAGAGGGCATACCTCCAGATCAG 75071 Query 24111 CAGAGACTGATTT 24123 ||| || |||||| Sbjct 75070 CAGCGATTGATTT 75058 >seq2 Length=1259180 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || |||||||| || || || || | || || | ||||| ||||| Sbjct 898088 AATGCAAATTTTCGTAAAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTC 898029 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || |||||| | |||||| ||| || ||||| |||||||| || || ||||| Sbjct 898028 GGATACTATCGAGAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATTCCACCGGATCA 897969 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||||||||| | | || ||||| || || || | | | | | ||||| || Sbjct 897968 GCAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACAA 897909 Query 24170 CATTCAAAAAGAATCTAC 24187 |||||| || || || || Sbjct 897908 CATTCAGAAGGAGTCGAC 897891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429905797533420