Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=1259180 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| || | || || || |||||||| ||||| ||||||||||||||||||||| | Sbjct 897859 AACCACCACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCG 897918 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || |||| |||| ||||| || ||||| ||||| | |||||||||| | Sbjct 897919 ATAAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTG 897978 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTC---ACACTATCAGTAGATT 34075 | | || || |||| | | ||||||||| || | || | | |||| | || | Sbjct 897979 GAATGCCTTCCTTGT-CTTGGATTTTTGCTT--TGACATTCTCGATAGTATCCGAAGCCT 898035 Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 | ||| | ||||| || || || || | ||||| || || ||||||||| Sbjct 898036 CTACTTCCAAAGTTATGGTCTTACCCGTCAAAGTTTTTACGAAAATTTGCATT 898088 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| || | || || || |||||||| ||||| ||||||||||||||||||||| | Sbjct 896827 AACCACCACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCG 896886 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 || || |||| |||| ||||| || ||||| ||||| | |||||||||| Sbjct 896887 ATAAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCC 896942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397034506862728