Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 >seq2 Length=1259180 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | |||||||| ||||||||||| || Sbjct 897861 CCACCACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGAT 897920 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || || | | |||| || | ||| || ||||| || Sbjct 897921 AAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGA 897980 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||||||| ||| | | || | || || | | ||| || Sbjct 897981 ATGCCTTCCTTGTCTTGGATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACT 898040 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || ||||| |||| ||||||||| ||||| ||||| Sbjct 898041 TCCAAAGTTATGGTCTTACCCGTCAAAGTTTTTACGAAAATTTGCAT 898087 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT 138543 || || ||||| ||||| ||||| ||||||||||| || |||||| |||| | | Sbjct 898305 ATGAGTCGCTGCTGGTCAGGAGGGATACCTTCTTTATCCTGGATTTTGGCCTTTACATTT 898364 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | || || | || ||||||||| | || | ||||| ||||| || ||||| ||| Sbjct 898365 TCGATCGTATCCGACGCCTCCACCTCCAGTGTTATAGTTTTGCCAGTAAGTGTTTTAACA 898424 Query 138604 AAAATCTGCATG 138615 |||||||||||| Sbjct 898425 AAAATCTGCATG 898436 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 138473 TACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTT 138532 |||||| | ||||||| |||||||| || || || || || ||||| || |||||| Sbjct 899052 TACCGGCAAAGATTAGTCGCTGTTGATCTGGTGGGATCCCCTCTTTATCCTGGATTTTCG 899111 Query 138533 GTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592 || | | || | ||||| | | |||||||| | || | ||||||||||| | Sbjct 899112 CCTTAACATTCTCGATCGTGTCAGATGCTTCCACCTCCAGTGTAATAGTTTTACCAGTAA 899171 Query 138593 GAGTTTTTACAAAAATCTGCATG 138615 ||||||| || |||||||||||| Sbjct 899172 GAGTTTTAACGAAAATCTGCATG 899194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496226644294080