Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 >seq2 Length=1259180 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||||||||| || ||||| || || || ||||| | ||| | || ||| Sbjct 897879 ACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCC 897938 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || ||||| || | |||| || ||||| ||||| ||||||||||| || ||||| Sbjct 897939 AGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGG 897998 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||||| || | || || |||| ||| ||||| | ||| | || || Sbjct 897999 ATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTA 898058 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||||||| ||||||||||| Sbjct 898059 CCCGTCAAAGTTTTTACGAAAATTTGCAT 898087 Score = 102 bits (112), Expect = 7e-17 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| ||||| ||||| ||||| || ||||| |||||||| |||||| ||||| | Sbjct 899434 ATCAGGCGTTGTTGGTCTGGCGGGATACCTTCCTTATCTTGTATTTTTGCTTTGACATTT 899493 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| |||| ||| ||||| ||||||| ||| || || |||| || || || Sbjct 899494 TCAATCGTGTCTGAAGCCTCCACTTCAAGAGTAATCGTCTTCCCAGTTAATGTCTTCACG 899553 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 899554 AAAATTTGCAT 899564 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 45216 CGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACG 45275 || ||||| || |||||||| ||||||||||| ||||| || || | ||| | Sbjct 898682 CGCTGCTGATCAGGCGGAATTCCTTCTTTATCCTGAATCTTGGCCTTTACATTTTCGATT 898741 Query 45276 GTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATT 45335 ||||| |||| ||| ||||| | || | |||||||| |||| || || ||||||||| Sbjct 898742 GTGTCAGAAGCCTCCACTTCTAAGGTGATTGTTTTGCCCGTTAACGTCTTCACAAAAATT 898801 Query 45336 TGCATCGCGCGACCAA 45351 ||||| ||| || || Sbjct 898802 TGCATACCGCCACGAA 898817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451970633169440