Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq21 158 2e-33 seq86 140 4e-28 >seq21 Length=496054 Score = 158 bits (174), Expect = 2e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 |||||||| | || || |||||||| || ||||| |||||||| || || || | | Sbjct 297306 TTCTTATCCAACCCATAAGCGATAGCAGCAGCCGTAGGTTCATTGATGATGCGGACAACA 297365 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || |||||||||||||| | |||||||| || ||||| || || | ||| |||||||| Sbjct 297366 TTGAGGCCAGCAATAGTACCTGCATCTTTGGTAGCTTGACGCTGTGCATCATTAAAGTAA 297425 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || ||||| || || || | |||||||| || ||||| | |||||| || || Sbjct 297426 GCGGGTACCGTGACCACTGCATGTTCCACTTTCTTTCCTAGATATGCTTCCGCAATTTCC 297485 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 ||||||||| || ||||| | |||||||||||||| Sbjct 297486 TTCATTTTGCCGAGTACCATTGCTGAAATCTCTTCAG 297522 Score = 82.4 bits (90), Expect = 1e-10 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||||||||| ||||| || ||| ||| ||||| || | ||| Sbjct 296873 TCGAAGTCTTCACCACCCAAGTGAGTATCACCATTGGTAGCTAGCACTTCGAAAACACCA 296932 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA 7566 ||||| | |||| ||| |||||||| ||||||||||| || || || Sbjct 296933 TTATCAATCGTCAACACCGACACATCAAAAGTACCACCACCAAGATCGAA 296982 >seq86 Length=232636 Score = 140 bits (154), Expect = 4e-28 Identities = 248/362 (69%), Gaps = 0/362 (0%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| || | ||| || || ||||| || || |||||||| || ||||||||||| | Sbjct 52933 TTCTTGTCCAAACCATAAGCAATAGCAGCAGCTGTTGGTTCGTTGATAATACGAAGGACG 52992 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || |||||||| | | | |||||| || ||||||||||| || |||||||||||| Sbjct 52993 TTTAGACCAGCAATTGCACCAGAATCTTTAGTTGCTTGTCGTTGTGAGTCGTTAAAGTAG 53052 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || | || || || | || | ||| ||| | | ||| || | || Sbjct 53053 GCGGGGACTGTGATAACAGCATCTTTCACCGCATGACCCAGAAAAGCTTCAGCCGTCTCC 53112 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCG 7834 ||||||||| | ||||||||| ||||| ||||| | | || |||||| || || Sbjct 53113 TTCATTTTGACCAAAACCATCGACGAAATTTCTTCTGGTGTGAAGGTTTTCGTCTCTCCC 53172 Query 7835 TTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAA 7894 || | ||||| | | | |||||| | || || | | || ||| | | ||| Sbjct 53173 TTGTATTCAACCTGCACTTTTGGTTTACCACCACCAGCATTCACTACTTTAAATGGCCAG 53232 Query 7895 TCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCA 7954 | ||||||||| ||| || ||| |||||| | || || || ||||| ||| Sbjct 53233 TGTTTCATATCTGATTGCACTGACCCGTCATCAAACTTACGACCAATCAGTCGCTTCGCA 53292 Query 7955 TC 7956 || Sbjct 53293 TC 53294 Score = 134 bits (148), Expect = 2e-26 Identities = 185/259 (71%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||| || || || ||||||||| ||||||||| ||| |||| || | | | Sbjct 52087 CCTCATCTGGATTGATGCTTTTATTCAATTCTTTACCAGAAAAGAAATCTGACAGGAGCT 52146 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 || | ||| ||||| |||||||| ||||| || || || || |||| |||| | || Sbjct 52147 TCTGCACTTTTGGGATACGTGTCGACCCACCCACTAACACAATATCATGAACTTGAGCTT 52206 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGT 7235 |||| || || | || || | || |||||| || || ||||| | ||||| | | Sbjct 52207 TATCCATTTTAGCATCACGTAATGCTTTTTCAACCGGATCCATTGTTGAGCGGAAAAGAT 52266 Query 7236 CCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGT 7295 | ||| ||||| ||||| || ||||| ||||| ||| ||||| |||| || ||| Sbjct 52267 CAGCACAAAGTTCTTCAAAGCGAGCACGCGTAATATTTGTGTAGAAGTCAATCCCCTCGA 52326 Query 7296 ATAACGAATCAATTTCAAT 7314 | ||||||||||| ||||| Sbjct 52327 ACAACGAATCAATCTCAAT 52345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635087038681760