Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 138 9e-28 >seq2 Length=1259180 Score = 138 bits (152), Expect = 9e-28 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| ||| ||||| ||| || ||||| |||||||| |||| | ||| |||| ||| Sbjct 897879 ACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCC 897938 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| ||||||| ||| ||||||| |||| ||| |||||||| Sbjct 897939 AGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGG 897998 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || ||| ||| ||| | | || || || ||||| || |||| || || || || Sbjct 897999 ATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTA 898058 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||||||||||||| ||||| ||||| Sbjct 898059 CCCGTCAAAGTTTTTACGAAAATTTGCAT 898087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380910839609772