Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=1259180 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | ||||| | || ||||| || || || | |||||||| || | Sbjct 898087 ATGCAAATTTTCGTAAAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTCG 898028 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| ||| ||||||||||| ||||| || || || ||||| Sbjct 898027 GATACTATCGAGAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATTCCACCGGATCAG 897968 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || ||||||||||| | | | | || ||||| ||| Sbjct 897967 CAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACAAC 897908 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| ||||| || || |||| Sbjct 897907 ATTCAGAAGGAGTCGACGCTGCATCTGGT 897879 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || ||||||| || || |||||||||||||| || || || ||||| | Sbjct 899193 ATGCAGATTTTCGTTAAAACTCTTACTGGTAAAACTATTACACTGGAGGTGGAAGCATCT 899134 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | ||| | ||| ||||| || ||||| || || || || ||||| Sbjct 899133 GACACGATCGAGAATGTTAAGGCGAAA-ATCCAGGATAAAGAGGGGATCCCACCAGATCA 899075 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 ||| || | ||||||||||| Sbjct 899074 ACAGCGACTAATCTTTGCCGG 899054 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 24749 GAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGA 24808 |||||||| || | || || | || | || || ||||| |||||||||| ||||| Sbjct 897008 GAAGTAGAGGCTTCGGATACTATCGAGAATGTCAAGCAAAA--TCCAAGACAAGGAAGGC 896951 Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || || || ||||| || | |||||||||| || || ||||||||||| | | | Sbjct 896950 ATTCCACCGGATCAGCAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACC 896891 Query 24869 ATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 | || ||||| |||||||| ||||| ||||| || || |||| Sbjct 896890 TTATCGGATTACAACATTCAGAAGGAGTCGACGCTGCATCTGGT 896847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449865184877920