Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 seq160 82.4 6e-11 >seq2 Length=1259180 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || || |||||||| || || || ||||| || | ||| ||| || Sbjct 898088 AATGCAAATTTTCGTAAAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTC 898029 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| ||| | || ||| || || ||||| |||||| | || |||||| Sbjct 898028 GGATACTATCGAGAATGTCAAAGCAAAAATCCAAGACAAGGAAGGCATTCCACCGGATCA 897969 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || ||||| || | ||| || || ||||||||||| | | || | |||||||||| Sbjct 897968 GCAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACAA 897909 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||| || || || ||| |||| |||| Sbjct 897908 CATTCAGAAGGAGTCGACGCTGCATCTGGT 897879 >seq160 Length=141507 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 ||| || || || |||||| | | ||| | ||||||||| | |||||||||||| || | Sbjct 49742 AGTTTCAGGATTCTCACATGCTGCACATAGCACAAACTTTCTGATGAAACCATCGAGAAT 49801 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 || || | || | | ||| || |||||| ||||| || ||||| ||||| || Sbjct 49802 ATCTTGCAGTTTGGCCGCGTCATGCTCGCCGTTCACGATAAAACGTTCATTTTTCATGTC 49861 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 | | |||||||| |||| || ||||| || ||||| || || Sbjct 49862 AAAATTGGTTTGCGCACCCAATTCACACCCAAAATACTTAGTTGG 49906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412812598393652