Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq328 86.0 1e-11 seq653 84.2 4e-11 >seq328 Length=76053 Score = 86.0 bits (94), Expect = 1e-11 Identities = 55/59 (93%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 122773 TTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 |||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 14002 TTAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 13945 >seq653 Length=21395 Score = 84.2 bits (92), Expect = 4e-11 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 11476 TAGCTCAGTTGGT-AGAGCATCAGACTTTTAATCTGAGGGTCGTGGGTTCGAGTCCCA 11532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825857292694560