Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 105 6e-18 >seq2 Length=1259180 Score = 105 bits (116), Expect = 6e-18 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || |||||||| | || | |||| |||||| |||||||| | Sbjct 897891 GTCGACTCCTTCTGAATGTTGTAATC--CGATAAGGTACGACCGTCCTCCAGCTGCTTTC 897948 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | || | || || | |||||| || || || |||||||||||||| ||| |||||| Sbjct 897949 CAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGGAT-TTTTGCT 898007 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||| | || || | | ||| || || | || | ||| || || |||| | Sbjct 898008 TTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTACCCGTCAAA 898067 Query 133641 GTTTTTACGAAAATCTGCAT 133660 |||||||||||||| ||||| Sbjct 898068 GTTTTTACGAAAATTTGCAT 898087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| ||||||| ||||||||||| |||||||| ||||| || || ||| || | Sbjct 898296 CCTGCGAAAATGAGTCGCTGCTGGTCAGGAGGGATACCTTCTTTATCCTGGATTTTGGCC 898355 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | || | ||| || | | |||||| || | || | |||||||| || || Sbjct 898356 TTTACATTTTCGATCGTATCCGACGCCTCCACCTCCAGTGTTATAGTTTTGCCAGTAAGT 898415 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| || |||||||||||| Sbjct 898416 GTTTTAACAAAAATCTGCATG 898436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483385969531360