Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 100 7e-16 >seq2 Length=1259180 Score = 100 bits (110), Expect = 7e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || || ||||||||||| || ||| || || |||| Sbjct 898072 AAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTCGGATACTATCGAGAAT 898013 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| || ||||| || ||||| ||| ||||| || ||||| ||||| Sbjct 898012 GTCAAAGCAAAA-ATCCAAGACAAGGAAGGCATTCCACCGGATCAGCAGAGACTGATCTT 897954 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||||||| |||| || || | || || | ||||||||| | ||||| ||||| Sbjct 897953 TGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACAACATTCAGAAGGAGTC 897894 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || || ||| | | ||||| Sbjct 897893 GACGCTGCATCTGGTTCTTCGTCTTCG 897867 Score = 84.2 bits (92), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || || ||||| ||||| || |||||||| |||||||||| ||||| Sbjct 898791 AAGACGTTAACGGGCAAAACAATCACCTTAGAAGTGGAGGCTTCTGACACAATCGAAAAT 898732 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| |||||||| || |||||||||||| ||| || || | ||||| ||| Sbjct 898731 GTAAAGGCCAAGATTCAGGATAAAGAAGGAATTCCGCCTGATCAGCAGCGTCTTATTTTC 898672 Query 206305 GCCGGAAAGCA 206315 || || | ||| Sbjct 898671 GCTGGTATGCA 898661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181733521056644