Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 1e-14 >seq2 Length=1259180 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||| ||| | | ||||| || ||||||||||| || | |||||| || || Sbjct 897878 AACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTC 897937 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | |||| || | ||| ||||| || || |||||||| || || Sbjct 897938 CAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTG 897997 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | || | |||||| | | ||| ||||| | || | || || Sbjct 897998 GATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTT 898057 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| |||| |||||||| |||||| ||||| Sbjct 898058 ACCCGTCAAAGTTTTTACGAAAATTTGCAT 898087 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 131982 TACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTT 132041 |||||| | ||||||| |||||||||||||| || || || |||||||| ||||| Sbjct 899052 TACCGGCAAAGATTAGTCGCTGTTGATCTGGTGGGATCCCCTCTTTATCCTGGATTTTCG 899111 Query 132042 GTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCA 132101 || | | || | || || | | ||||| || | || | ||||||||||| | Sbjct 899112 CCTTAACATTCTCGATCGTGTCAGATGCTTCCACCTCCAGTGTAATAGTTTTACCAGTAA 899171 Query 132102 GAGTTTTTATGAAAATCTGCATG 132124 ||||||| | ||||||||||||| Sbjct 899172 GAGTTTTAACGAAAATCTGCATG 899194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476576860163040