Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2 120 3e-22 >seq2 Length=1259180 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||| ||| | ||| |||||| |||||||||||||| | Sbjct 897861 CCACCACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGAT 897920 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || |||| ||||||||||| || ||||| |||| | |||||| |||| ||| Sbjct 897921 AAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGA 897980 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || |||||||| ||| |||||| || | | | | | || || | || || Sbjct 897981 ATGCCTTCCTTGTCTTGGAT-TTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTAC 898039 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||| || || || ||||||||||||||||| || || || ||||||| Sbjct 898040 TTCCAAAGTTATGGTCTTACCCGTCAAAGTTTTTACGAAAATTTGCATTC 898089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||| ||| | ||| |||||| |||||||||||||| | Sbjct 896829 CCACCACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGAT 896888 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || |||| ||||||||||| || ||||| |||| | |||||| |||| ||| Sbjct 896889 AAGGTACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGA 896948 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 | || |||||||| || |||||||| Sbjct 896949 ATGCCTTCCTTGTCTTGGA--TTTTGCTT 896975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450761120321120