Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 136 4e-27 seq67 118 1e-21 seq13 104 2e-17 >seq2 Length=1259180 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| || ||||| ||||||||||| || | ||| || ||| || Sbjct 897879 ACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCC 897938 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| |||| | ||||||||| || || |||||||| || ||||| Sbjct 897939 AGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGG 897998 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 |||||| |||||| || | || || || | || || || | ||| ||||| ||| Sbjct 897999 ATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTCTTA 898058 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || |||||||| ||||||||||||||| Sbjct 898059 CCCGTCAAAGTTTTTACGAAAATTTGCATT 898088 Score = 102 bits (112), Expect = 8e-17 Identities = 111/146 (76%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||||| || || || || ||||| || ||||| || ||||| |||||| | Sbjct 899425 CCAGCAAAAATCAGGCGTTGTTGGTCTGGCGGGATACCTTCCTTATCTTGTATTTTTGCT 899484 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 ||||| || | ||||| || | ||||| || |||||||| || || || ||||| Sbjct 899485 TTGACATTTTCAATCGTGTCTGAAGCCTCCACTTCAAGAGTAATCGTCTTCCCAGTTAAT 899544 Query 134694 GTTTTAACGAAAATTTGCAT-TTTGT 134718 || || |||||||||||||| ||||| Sbjct 899545 GTCTTCACGAAAATTTGCATGTTTGT 899570 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || ||||| || ||||| ||||||||||| || | ||| || ||| || Sbjct 896847 ACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCCTCC 896906 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| |||| | ||||||||| || || |||||||| || ||||| Sbjct 896907 AGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGG 896966 Query 134625 ATTTT 134629 ||||| Sbjct 896967 ATTTT 896971 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || || ||||| | |||||||||||| ||||| || |||||||| || ||||| || Sbjct 898667 CCAGCGAAAATAAGACGCTGCTGATCAGGCGGAATTCCTTCTTTATCCTGAATCTTGGCC 898726 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||| || | ||||| || | || || ||||| || ||||| Sbjct 898727 TTTACATTTTCGATTGTGTCAGAAGCCTCCACTTCTAAGGTGATTGTTTTGCCCGTTAAC 898786 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || || ||||||||||| Sbjct 898787 GTCTTCACAAAAATTTGCAT 898806 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||| || | ||||| ||||| || || || || ||||| || || ||||| Sbjct 899054 CCGGCAAAGATTAGTCGCTGTTGATCTGGTGGGATCCCCTCTTTATCCTGGATTTTCGCC 899113 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||||| || | |||||| || || ||||| |||||||| || | | Sbjct 899114 TTAACATTCTCGATCGTGTCAGATGCTTCCACCTCCAGTGTAATAGTTTTACCAGTAAGA 899173 Query 134694 GTTTTAACGAAAATTTGCAT 134713 |||||||||||||| ||||| Sbjct 899174 GTTTTAACGAAAATCTGCAT 899193 >seq67 Length=267328 Score = 118 bits (130), Expect = 1e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 |||||||||||||| ||||||||||| || |||||||| ||||| || ||||| || | Sbjct 75051 CCTGCAAAAATCAATCGCTGCTGATCTGGAGGTATGCCCTCTTTGTCCTGAATCTTAGCT 75110 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | ||| || || ||||| || || || ||||| || ||||| ||||| Sbjct 75111 TTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGTGTAATCGTCTTACCAGTTAAT 75170 Query 134694 GTTTTAACGAAAATTTGCAT 134713 || || |||||||||||||| Sbjct 75171 GTCTTGACGAAAATTTGCAT 75190 >seq13 Length=582103 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || ||||||||||| | ||||| || || ||||| ||||||||||| || |||||||| Sbjct 196596 TTACCTGCAAAAATAAGTCGCTGTTGGTCAGGCGGAATGCCTTCTTTATCCTGAATTTTA 196537 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| || || | ||||| |||||||| || || || || || ||||| || ||| Sbjct 196536 GCTTTCACATTCTCAATAGTGTCAGACGATTCTACCTCAAGGGTGATCGTTTTTCCTGTT 196477 Query 134691 AAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| || ||||| ||| Sbjct 196476 AATGTCTTCACGAATATCTGCATCTTG 196450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505361986045280