Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq64 89.7 7e-13 >seq64 Length=281649 Score = 89.7 bits (98), Expect = 7e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 69081 AAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATT 69140 |||||| || ||||| |||| |||||||| ||||| || || || | |||||||||||| Sbjct 111797 AAGAATGAAGGCATCAGCCAGGCCCTGAACACCAATGCCAATCGGACGATGTCTCTTATT 111738 Query 69141 TGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCG 69200 || | ||| ||||| || | ||||||||||| ||| || | || || | ||| | Sbjct 111737 AGACCGTTCTGCTTCCGGTACTGGATAATAATTGCGATCGATGACCTTGTTCAAATTCCT 111678 Query 69201 GACTACTACTTT 69212 || |||||||| Sbjct 111677 AACAACTACTTT 111666 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 68728 CCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTT 68787 || ||||| || |||||||||| | |||||||||||| || || | | |||||| || Sbjct 112551 CCGGATAAGACATTACGAGTGTACACATTACTGGTATAAGGCTCAATACTTTCATTGTTG 112492 Query 68788 CCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATT 68840 || || || || || ||||| ||||| ||||| ||||| | ||||| ||||| Sbjct 112491 CCAAGTATCTGCGCGGTTGAAGCAGTAGGCATTGGTGCTAATAATAAGCTATT 112439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686859308220960