Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 123 6e-23 seq13 105 2e-17 >seq2 Length=1259180 Score = 123 bits (136), Expect = 6e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || || || || || ||||| || || ||||| ||||||| | ||| Sbjct 897866 ACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGT 897925 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || ||||||||||| || || ||||| || | || || || || |||| || Sbjct 897926 ACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCC 897985 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||| ||||| ||| ||| || || ||||| || || || || || || | Sbjct 897986 TTCCTTGTCTTGGATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAA 898045 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||| || ||||| ||||| | ||| ||||| || | |||||| Sbjct 898046 AGTTATGGTCTTACCCGTCAAAGTTTTTACGAAAATTTGCATT 898088 Score = 96.9 bits (106), Expect = 8e-15 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || || || || || ||||| || || ||||| ||||||| | ||| Sbjct 896834 ACGAAGACGAAGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGT 896893 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || ||||||||||| || || ||||| || | || || || || |||| || Sbjct 896894 ACGACCGTCCTCCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCC 896953 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA 211057 ||||||||| |||| ||||| || || || ||||| || || || Sbjct 896954 TTCCTTGTCTTGGA--TTTTGCTTGACATTCTCGATAGTATCCGA 896996 >seq13 Length=582103 Score = 105 bits (116), Expect = 2e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || ||||| || ||||| || ||||||||||| |||| ||||| || ||||| || || Sbjct 196596 TTACCTGCAAAAATAAGTCGCTGTTGGTCAGGCGGAATGCCTTCTTTATCCTGAATTTTA 196537 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 |||||| || || || |||||||| ||| ||||| || |||||||| ||||| || Sbjct 196536 GCTTTCACATTCTCAATAGTGTCAGACGATTCTACCTCAAGGGTGATCGTTTTTCCTGTT 196477 Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117 | ||||| || || | |||||| || Sbjct 196476 AATGTCTTCACGAATATCTGCATCTT 196451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159066395175860