Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 seq13 87.8 1e-12 >seq2 Length=1259180 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| |||||||| ||||| | ||||| || || || ||| | ||||| || | | Sbjct 898088 AATGCAAATTTTCGTAAAAACTTTGACGGGTAAGACCATAACTTTGGAAGTAGAGGCTTC 898029 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||| ||| | || ||| | ||| |||||| | ||||| ||||| | || || |||| Sbjct 898028 GGATACTATCGAGAATGTCAAAGCAAAAA-TCCAAGACAAGGAAGGCATTCCACCGGATC 897970 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | | || ||||| || || || ||||| |||| || || ||| ||||||| Sbjct 897969 AGCAGAGACTGATCTTTGCTGGAAAGCAGCTGGAGGACGGTCGTACCTTATCGGATTACA 897910 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| || || ||||| || | ||| | ||| Sbjct 897909 ACATTCAGAAGGAGTCGACGCTGCATCTGGTT 897878 >seq13 Length=582103 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| || || | || |||||||||||||| || || || || || Sbjct 196451 AAGATGCAGATATTCGTGAAGACATTAACAGGAAAAACGATCACCCTTGAGGTAGAATCG 196510 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||||| |||| ||| | ||| | |||||| || |||||||| | ||||| || Sbjct 196511 TCTGACACTATTGAGAATGTGAAAGC-TAAAATTCAGGATAAAGAAGGCATTCCGCCTGA 196569 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAA 23753 |||||||| | || ||||| || || Sbjct 196570 CCAACAGCGACTTATTTTTGCAGGTAA 196596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337985855248112