Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq64 95.1 2e-14 >seq64 Length=281649 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 76084 AAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 |||||| || ||||| || || |||||||| ||||| ||||| || | |||||||||||| Sbjct 111797 AAGAATGAAGGCATCAGCCAGGCCCTGAACACCAATGCCAATCGGACGATGTCTCTTATT 111738 Query 76144 GGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203 || ||| ||||| || | || |||||||| ||| || | || || | ||| || Sbjct 111737 AGACCGTTCTGCTTCCGGTACTGGATAATAATTGCGATCGATGACCTTGTTCAAATTCCT 111678 Query 76204 GACAACTACTTT 76215 ||||||||||| Sbjct 111677 AACAACTACTTT 111666 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||| ||| || || || | |||||||| | |||||||||||| || || | | | Sbjct 112560 TGAAAACTTCCGGATAAGACATTACGAGTGTACACATTACTGGTATAAGGCTCAATACTT 112501 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 |||||||| || | || || || ||||||||||| ||||| ||||| | ||||| ||| Sbjct 112500 TCATTGTTGCCAAGTATCTGCGCGGTTGAAGCAGTAGGCATTGGTGCTAATAATAAGCTA 112441 Query 75842 TT 75843 || Sbjct 112440 TT 112439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712883033076480