Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 125 2e-23 >seq2 Length=1259180 Score = 125 bits (138), Expect = 2e-23 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || ||||| || || ||||||||||| | ||| || | || || Sbjct 897876 AGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCC 897935 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || |||||||| |||| | || |||||||| | Sbjct 897936 TCCAGCTGCTTT--CCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGT 897993 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| |||||| ||||||| |||| | | || ||| ||||||||| | ||| || | Sbjct 897994 CTTGGATTTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGG 898053 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || ||||| | ||| || ||||| | |||||| Sbjct 898054 TCTTACCCGTCAAAGTTTTTACGAAAATTTGCATT 898088 Score = 96.9 bits (106), Expect = 8e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 || || || || || | || ||||| | || ||| |||||||| ||||| |||||| | Sbjct 899425 CCAGCAAAAATCAGGCGTTGTTGGTCTGGCGGGATACCTTCCTTATCTTGTATTTTTGCT 899484 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 |||||| | || | |||||||| ||| |||||||||||||| || || || || | Sbjct 899485 TTGACATTTTCAATCGTGTCTGAAGCCTCCACTTCAAGAGTAATCGTCTTCCCAGTTAAT 899544 Query 152085 GTCTTCACGAAGACCTGCATTTT 152107 ||||||||||| | ||||| || Sbjct 899545 GTCTTCACGAAAATTTGCATGTT 899567 Score = 95.1 bits (104), Expect = 3e-14 Identities = 124/169 (73%), Gaps = 6/169 (4%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| || || ||||| || || ||||||||||| | ||| || | || || Sbjct 896844 AGAACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATCCGATAAGGTACGACCGTCC 896903 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || || ||||| || |||||||| |||| | || |||||||| | Sbjct 896904 TCCAGCTGCTTT--CCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGT 896961 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTC 152059 |||| | ||||| |||||| |||| | | || ||| ||||||||| Sbjct 896962 CTTGGA--TTTTGCTTGACATTCTCGATAGTATCCGAAGCCTCTACTTC 897008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153735588891644