Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Loa_20loa_20[refseq_20GCF_5F000183805.2_202012-07-06] 5,764 sequences; 91,365,832 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 9e-15 seq67 86.0 5e-12 >seq2 Length=1259180 Score = 95.1 bits (104), Expect = 9e-15 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGG--CGCTCGTCGT 44186 ||||| || ||||| |||||| || ||||||||||| ||| || || |||| | Sbjct 897879 ACCAGATGCAGCGTCGACTCCTTCTGAATGTTGTAATC--CGATAAGGTACGACCGTCCT 897936 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| || |||||||||| | ||||||||| | || | |||||||| || Sbjct 897937 CCAGCTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCCGGTGGAATGCCTTCCTTGTCTT 897996 Query 44247 TTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 || || ||||| | ||| | || || || | | || || |||| || || ||| Sbjct 897997 GGAT-TTTTGCTTTGACATTCTCGATAGTATCCGAAGCCTCTACTTCCAAAGTTATGGTC 898055 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | || || ||||| |||||||| Sbjct 898056 TTACCCGTCAAAGTTTTTACGAAAATTTGCAT 898087 >seq67 Length=267328 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||| ||||| ||||||||||||| ||| | || || || ||| ||||| || Sbjct 75051 CCTGCAAAAATCAATCGCTGCTGATCTGGAGGTATGCCCTCTTTGTCCTGAATCTTA-GC 75109 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 || | ||| | || || || | |||||| ||||| | ||||||||||| || || | Sbjct 75110 TTTTACATTCTCAATTGTATCCGAGGATTCGACCTCAAGTGTAATCGTCTTACCAGTTAA 75169 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| |||||||| Sbjct 75170 TGTCTTGACGAAAATTTGCAT 75190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359965111124388