Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq18229 98.7 1e-15
seq16001 98.7 1e-15
seq12421 98.7 1e-15
seq91 98.7 1e-15
>seq18229
Length=3682
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| ||||||| || || || |||||||| ||| | ||| |||| || |
Sbjct 1644 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 1703
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| |||| || ||||||||||||||||| ||||| || ||||||||
Sbjct 1704 GATACCATTGAGAATGTTAAGGCA-AAAATTCAAGATAAAGAGGGTATCCCGCCTGATCA 1762
Query 124658 ACA 124660
|||
Sbjct 1763 ACA 1765
>seq16001
Length=4432
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| ||||||| || || || |||||||| ||| | ||| |||| || |
Sbjct 1953 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 2012
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| |||| || ||||||||||||||||| ||||| || ||||||||
Sbjct 2013 GATACCATTGAGAATGTTAAGGCA-AAAATTCAAGATAAAGAGGGTATCCCGCCTGATCA 2071
Query 124658 ACA 124660
|||
Sbjct 2072 ACA 2074
>seq12421
Length=6087
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| ||||||| || || || |||||||| ||| | ||| |||| || |
Sbjct 970 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 1029
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| |||| || ||||||||||||||||| ||||| || ||||||||
Sbjct 1030 GATACCATTGAGAATGTTAAGGCA-AAAATTCAAGATAAAGAGGGTATCCCGCCTGATCA 1088
Query 124658 ACA 124660
|||
Sbjct 1089 ACA 1091
>seq91
Length=67459
Score = 98.7 bits (108), Expect = 1e-15
Identities = 97/123 (79%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| ||||||| || || || |||||||| ||| | ||| |||| || |
Sbjct 15069 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 15128
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||| ||| ||| |||| || ||||||||||||||||| ||||| || ||||||||
Sbjct 15129 GATACCATTGAGAATGTTAAGGCA-AAAATTCAAGATAAAGAGGGTATCCCGCCTGATCA 15187
Query 124658 ACA 124660
|||
Sbjct 15188 ACA 15190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755208625932800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |