Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_005260.1
Length=233234
Score E
Sequences producing significant alignments: (Bits) Value
seq3986 84.2 3e-11
seq2721 84.2 3e-11
seq757 84.2 3e-11
seq751 84.2 3e-11
>seq3986
Length=17750
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074
|||||||| ||||||||||||| |||||| | | |||| || | | |||||||||||||
Sbjct 4488 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 4547
Query 108075 GCTATAGAGGC 108085
|||||||||||
Sbjct 4548 GCTATAGAGGC 4558
>seq2721
Length=22421
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074
|||||||| ||||||||||||| |||||| | | |||| || | | |||||||||||||
Sbjct 9998 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 9939
Query 108075 GCTATAGAGGC 108085
|||||||||||
Sbjct 9938 GCTATAGAGGC 9928
>seq757
Length=38509
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074
|||||||| ||||||||||||| |||||| | | |||| || | | |||||||||||||
Sbjct 7963 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 7904
Query 108075 GCTATAGAGGC 108085
|||||||||||
Sbjct 7903 GCTATAGAGGC 7893
>seq751
Length=38724
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074
|||||||| ||||||||||||| |||||| | | |||| || | | |||||||||||||
Sbjct 13501 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 13560
Query 108075 GCTATAGAGGC 108085
|||||||||||
Sbjct 13561 GCTATAGAGGC 13571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 745976449999040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |