Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq3986 84.2 3e-11 seq2721 84.2 3e-11 seq757 84.2 3e-11 seq751 84.2 3e-11 >seq3986 Length=17750 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 4488 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 4547 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 4548 GCTATAGAGGC 4558 >seq2721 Length=22421 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 9998 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 9939 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 9938 GCTATAGAGGC 9928 >seq757 Length=38509 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 7963 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 7904 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 7903 GCTATAGAGGC 7893 >seq751 Length=38724 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 108015 GCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCACTGA 108074 |||||||| ||||||||||||| |||||| | | |||| || | | ||||||||||||| Sbjct 13501 GCCCCCACGCGGGATTGAACCGCGGACCTTCAGTTTACGAGACTGACGCTCTACCACTGA 13560 Query 108075 GCTATAGAGGC 108085 ||||||||||| Sbjct 13561 GCTATAGAGGC 13571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745976449999040