Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq22862 82.4 8e-11
seq13211 82.4 8e-11
seq545 82.4 8e-11
>seq22862
Length=2551
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814
|| ||||| ||||| ||||| |||||| | |||||||| |||| || ||||||||||||
Sbjct 2241 AAAGCTCGAAATCCTTTTGATTTTATGGAGAACATTTCTATTGAAGGGAAGACCAACTTT 2182
Query 52815 TTCGAGAAGCGAGTC 52829
||||||||| ||||
Sbjct 2181 TTCGAGAAGAAAGTC 2167
>seq13211
Length=5644
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814
|| ||||| ||||| ||||| |||||| | |||||||| |||| || ||||||||||||
Sbjct 5303 AAAGCTCGAAATCCTTTTGATTTTATGGAGAACATTTCTATTGAAGGGAAGACCAACTTT 5362
Query 52815 TTCGAGAAGCGAGTC 52829
||||||||| ||||
Sbjct 5363 TTCGAGAAGAAAGTC 5377
>seq545
Length=42957
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 52755 AACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTT 52814
|| ||||| ||||| ||||| |||||| | |||||||| |||| || ||||||||||||
Sbjct 29132 AAAGCTCGAAATCCTTTTGATTTTATGGAGAACATTTCTATTGAAGGGAAGACCAACTTT 29191
Query 52815 TTCGAGAAGCGAGTC 52829
||||||||| ||||
Sbjct 29192 TTCGAGAAGAAAGTC 29206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496099898877120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |