Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= NC_015323.1 Length=45667 Score E Sequences producing significant alignments: (Bits) Value seq7934 87.8 5e-13 seq1650 87.8 5e-13 >seq7934 Length=9999 Score = 87.8 bits (96), Expect = 5e-13 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 991 AGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGTGGGGGCGGGTGTG 1050 ||||||||||| || || ||| | ||| |||| |||||| |||||||| || ||||| Sbjct 7513 AGAATCGCTCCACGTTCTGGACTCGCTTCAAAAAACTTTATTGATGTGGGTGCTGGTGTA 7572 Query 1051 ATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCTTGTTCAATTTTTCG 1101 || ||| | |||||||| || ||| | ||||| || | ||||| |||||| Sbjct 7573 ATCGATCCGGATTATCGTGGAGAACTTAAGGTTCTGCTTTTCAACTTTTCG 7623 >seq1650 Length=28442 Score = 87.8 bits (96), Expect = 5e-13 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 991 AGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGTGGGGGCGGGTGTG 1050 ||||||||||| || || ||| | ||| |||| |||||| |||||||| || ||||| Sbjct 1638 AGAATCGCTCCACGTTCTGGACTCGCTTCAAAAAACTTTATTGATGTGGGTGCTGGTGTA 1697 Query 1051 ATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCTTGTTCAATTTTTCG 1101 || ||| | |||||||| || ||| | ||||| || | ||||| |||||| Sbjct 1698 ATCGATCCGGATTATCGTGGAGAACTTAAGGTTCTGCTTTTCAACTTTTCG 1748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145967378703208