Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq783 122 2e-22
seq5107 118 2e-21
seq22364 113 1e-19
seq16268 113 1e-19
seq9317 113 1e-19
seq8967 113 1e-19
seq5419 113 1e-19
seq1038 113 1e-19
seq13147 111 3e-19
seq11515 111 3e-19
seq856 111 3e-19
seq10671 109 1e-18
seq4503 104 5e-17
seq8819 102 2e-16
seq8172 102 2e-16
seq659 102 2e-16
>seq783
Length=38083
Score = 122 bits (134), Expect = 2e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | |||||| ||||||||||| ||
Sbjct 21110 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAACTGCTTCCCTGCGAAGATGAGA 21051
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| ||||| |||
Sbjct 21050 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 20991
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 20990 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 20931
Query 195136 TGCAT 195140
|||||
Sbjct 20930 TGCAT 20926
>seq5107
Length=14694
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 12798 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 12739
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| ||||| |||
Sbjct 12738 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTCTCGATG 12679
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 12678 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 12619
Query 195136 TGCAT 195140
|||||
Sbjct 12618 TGCAT 12614
>seq22364
Length=2645
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| ||||| | || | ||||| || | || || ||||||||||| ||
Sbjct 2194 TGAATATTGTAGTCGGCCAACGTACGACCATCCTCCAATTGTTTCCCTGCGAAGATTAGA 2135
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 2134 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 2075
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 2074 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 2015
Query 195136 TGCAT 195140
|||||
Sbjct 2014 TGCAT 2010
>seq16268
Length=4329
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 3175 TGAATATTGTAGTCTGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 3234
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 3235 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 3294
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 3295 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 3354
Query 195136 TGCAT 195140
|||||
Sbjct 3355 TGCAT 3359
>seq9317
Length=8507
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 946 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 887
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 886 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 827
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 826 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 767
Query 195136 TGCAT 195140
|||||
Sbjct 766 TGCAT 762
>seq8967
Length=8834
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 6516 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 6575
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 6576 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 6635
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 6636 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 6695
Query 195136 TGCAT 195140
|||||
Sbjct 6696 TGCAT 6700
>seq5419
Length=14078
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 13746 TGAATATTGTAGTCAGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 13687
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 13686 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 13627
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 13626 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 13567
Query 195136 TGCAT 195140
|||||
Sbjct 13566 TGCAT 13562
>seq1038
Length=34009
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015
||||||||||| || || | || | ||||| || | ||||| ||||||||||| ||
Sbjct 17488 TGAATATTGTAGTCTGCCAACGTACGACCATCCTCCAATTGCTTCCCTGCGAAGATGAGA 17429
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
||||| || || || || || || || || || || || || |||||| || || |||
Sbjct 17428 CGTTGCTGCTCCGGGGGGATCCCCTCCTTCTCCTGGATCTTGGCCTTGACATTTTCGATG 17369
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
|||||||| ||||| || | ||| | |||||| ||||| | ||||| || || |||
Sbjct 17368 GTGTCCGACTGCTCCACATCCAAGGTGATCGTCTTCCCTGTGAGCGTTTTGACAAAGACT 17309
Query 195136 TGCAT 195140
|||||
Sbjct 17308 TGCAT 17304
>seq13147
Length=5676
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 4953 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 5012
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 5013 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 5072
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 5073 ATTTGCATT 5081
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| || || || ||
Sbjct 5226 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGAT 5285
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| || ||||| |
Sbjct 5286 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGAT 5345
Query 195135 TTGCAT 195140
|||||
Sbjct 5346 CTGCAT 5351
>seq11515
Length=6677
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 5950 AGGCGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 5891
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 5890 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 5831
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 5830 ATTTGCATT 5822
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| || || || ||
Sbjct 4805 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGAT 4746
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| || ||||| |
Sbjct 4745 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGAT 4686
Query 195135 TTGCAT 195140
|||||
Sbjct 4685 CTGCAT 4680
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
|||||| || || |||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct 5675 TCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 5616
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || || ||||||||| || || | |||||||| || | || || || || |
Sbjct 5615 GGTATCAGACGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGAT 5556
Query 195135 TTGCAT 195140
|||||
Sbjct 5555 CTGCAT 5550
>seq856
Length=36659
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||||||||| ||||| || |||||||| || ||||||||| ||
Sbjct 5677 AGACGCTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACGTTTTCG 5618
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| ||| ||| ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 5617 ATAGTGTCAGAAGCTTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 5558
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 5557 ATTTGCATT 5549
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
|||||| || || |||||||| ||||||||||| ||||| || |||||||||||||||
Sbjct 5402 TCGTTGCTGATCAGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 5343
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || || ||||||||| ||||| | |||||||| || | || || || || |
Sbjct 5342 GGTATCAGACGCTTCCACTTCTAGGGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGAT 5283
Query 195135 TTGCAT 195140
|||||
Sbjct 5282 CTGCAT 5277
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| || || || ||
Sbjct 4862 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACATTTTCGAT 4803
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| || ||||| |
Sbjct 4802 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGAT 4743
Query 195135 TTGCAT 195140
|||||
Sbjct 4742 CTGCAT 4737
>seq10671
Length=7258
Score = 109 bits (120), Expect = 1e-18
Identities = 170/255 (67%), Gaps = 41/255 (16%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||||||||| || || || ||||| |||||||| ||||| || ||||| || | || ||
Sbjct 3976 CAAAACAAGATGGAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTACGACCGTC 3917
Query 194988 TTCGAGCTGCTTACCTGCGAAGAT------------------------------------ 195011
||||||||| ||||| ||||||||
Sbjct 3916 TTCGAGCTGTTTACCAGCGAAGATCTAAAAACATGAAAAGTCAGAATTAGACAGGGCAAA 3857
Query 195012 -----AAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
||| || || |||||||| ||||| || ||||||||||||||||| |||||||
Sbjct 3856 CAAACAAGACGCTGCTGGTCTGGCGGAATCCCCTCTTTGTCTTGAATTTTAGCCTTGACG 3797
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|| ||||| || ||||| || || || || || | ||||| |||||||| || ||
Sbjct 3796 TTTTCAATCGTATCCGATGCCTCAACCTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTA 3737
Query 195127 ACGAACACTTGCATT 195141
||||| | |||||||
Sbjct 3736 ACGAAAATTTGCATT 3722
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| |||||||| || |||||||||||||| |||||| || |||||
Sbjct 4116 CGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 4057
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || |||||||| || | |||||||| |||| |||||| || || |
Sbjct 4056 GTGTCAGATGCCTCAACTTCAAGAGTTATAGTCTTTCCAGTCAGAGTTTTGACAAAGATC 3997
Query 195136 TGCATT 195141
||||||
Sbjct 3996 TGCATT 3991
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || ||||| || || || ||||| |||||||||||||| ||| || || |||||
Sbjct 3303 CGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATT 3244
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || ||| |||||||| || | |||||||| ||||| || |||||||| |
Sbjct 3243 GTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATC 3184
Query 195136 TGCAT 195140
|||||
Sbjct 3183 TGCAT 3179
>seq4503
Length=16266
Score = 104 bits (114), Expect = 5e-17
Identities = 169/256 (66%), Gaps = 42/256 (16%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||||||||| || || || ||||| |||||||| ||||| || ||||| || | || ||
Sbjct 8469 CAAAACAAGATGGAGTGTAGACTCCTTTTGAATGTTGTAGTCTGCAAGGGTACGACCGTC 8410
Query 194988 TTCGAGCTGCTTACCTGCGAAGATA----------------------------------- 195012
||||||||| ||||| ||||||||
Sbjct 8409 TTCGAGCTGTTTACCAGCGAAGATCTAAAAACATGAAAAGATAAGAATTAGAAAGGGCAA 8350
Query 195013 -------AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGAC 195065
|| || || |||||||| ||||| || ||||||||||||||||| |||||
Sbjct 8349 ACAAACCAGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGAC 8290
Query 195066 GTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTT 195125
||| ||||| || ||||| || ||||| || || | ||||| |||||||| || ||
Sbjct 8289 GTTTTCAATCGTATCCGATGCCTCAACTTCGAGAGTGATAGTCTTGCCTGTCAACGTCTT 8230
Query 195126 TACGAACACTTGCATT 195141
||||| | |||||||
Sbjct 8229 AACGAAAATTTGCATT 8214
Score = 95.1 bits (104), Expect = 3e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || ||||| || || || ||||| |||||||||||||| ||| || || |||||
Sbjct 7800 CGCTGCTGGTCCGGCGGGATACCTTCCTTGTCTTGAATTTTGGCCTTAACATTTTCAATC 7741
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || ||| |||||||| || | |||||||| ||||| || |||||||| |
Sbjct 7740 GTGTCAGAGGCTTCAACTTCAAGAGTGATGGTCTTTCCAGTCAACGTCTTTACGAAGATC 7681
Query 195136 TGCAT 195140
|||||
Sbjct 7680 TGCAT 7676
Score = 93.3 bits (102), Expect = 9e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || || || ||||| || |||||||| ||||| || || || ||||||
Sbjct 8076 AGACGCTGCTGATCAGGTGGAATACCCTCTTTGTCCTGAATCTTAGCTTTCACATTCTCA 8017
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
||||| ||||| |||||||||||| |||| |||||||| || | ||| || || ||
Sbjct 8016 ATGGTATCCGAGGCTTCCACTTCAAGAGTAATAGTCTTTCCCGTAAGAGTCTTCACAAAA 7957
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 7956 ATTTGCATT 7948
Score = 93.3 bits (102), Expect = 9e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| ||||| || || |||||||||||||| |||||| || |||||
Sbjct 8609 CGCTGCTGATCTGGCGGAATCCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 8550
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || |||||||| || | |||||||| || ||||| || || || | |
Sbjct 8549 GTGTCAGATGCCTCAACTTCAAGAGTGATAGTCTTTCCAGTTAAAGTCTTGACAAAGATT 8490
Query 195136 TGCATT 195141
||||||
Sbjct 8489 TGCATT 8484
>seq8819
Length=8975
Score = 102 bits (112), Expect = 2e-16
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || || ||||| ||||||||||| ||||| |||||||| |||||| || ||
Sbjct 8402 AGACGCTGCTGATCTGGTGGAATGCCTTCCTTGTCCTGAATTTTGGCCTTGACATTTTCT 8461
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| ||||| || || ||||| ||||| | ||||| || ||||||||||| |||||
Sbjct 8462 ATAGTGTCAGATGCCTCAACTTCGAGGGTGATAGTCTTCCCAGTCAAAGTTTTCACGAAG 8521
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 8522 ATTTGCATT 8530
Score = 87.8 bits (96), Expect = 4e-12
Identities = 97/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
|||||| || || |||||||| ||| ||||||| ||||| || |||||||||||||||
Sbjct 8675 TCGTTGCTGATCAGGAGGAATTCCT-CTTTGTCCTGAATCTTGGCCTTGACGTTCTCAAT 8733
Query 195075 GGTGTCCGAACTTTCCACTTCAAGG-GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACA 195133
||| || || ||||||||| ||| || | |||||||| || | || || || || |
Sbjct 8734 GGTATCAGACGCTTCCACTTCTAGGAGTGATTGTCTTTCCCGTGAGGGTCTTCACAAAGA 8793
Query 195134 CTTGCAT 195140
|||||
Sbjct 8794 TCTGCAT 8800
>seq8172
Length=9710
Score = 102 bits (112), Expect = 2e-16
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || |||||||| ||||| || ||||||||||||||||| |||||||| |||
Sbjct 9425 AGACGCTGCTGGTCTGGTGGAATCCCCTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCA 9484
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132
|| || ||||| || ||||| || || | ||||| |||||||| || || |||||
Sbjct 9485 ATCGTATCCGATGCCTCAACTTCGAGAGTGATAGTCTTGCCTGTCAACGTCTTAACGAAA 9544
Query 195133 ACTTGCATT 195141
| |||||||
Sbjct 9545 ATTTGCATT 9553
Score = 96.9 bits (106), Expect = 8e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|| || || ||||| |||||||| || |||||||||||||| |||||| || |||||
Sbjct 9154 CGCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATTTTGGCCTTGACATTTTCAATC 9213
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || || ||||| || || | ||||| || ||||||||||| || || | |
Sbjct 9214 GTGTCAGATGCCTCAACTTCGAGAGTGATAGTCTTACCAGTCAAAGTTTTGACAAAAATT 9273
Query 195136 TGCATT 195141
||||||
Sbjct 9274 TGCATT 9279
>seq659
Length=40447
Score = 102 bits (112), Expect = 2e-16
Identities = 98/126 (78%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195015 TCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAAT 195074
||| || || || |||||||||||||| ||||||||||||||| ||| ||||| || ||
Sbjct 38416 TCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCTTGAATTTTTGCCTTCACGTTTTCGAT 38475
Query 195075 GGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACAC 195134
||| || ||| || |||||||| || | ||| ||||| || | ||| || ||||| |
Sbjct 38476 GGTATCAGAAGCCTCGACTTCAAGAGTGATCGTTTTTCCAGTAAGAGTCTTGACGAAGAT 38535
Query 195135 TTGCAT 195140
|||||
Sbjct 38536 CTGCAT 38541
Score = 93.3 bits (102), Expect = 9e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
|||| | |||||| || || ||||| || ||||||||||| ||||| || |||||||
Sbjct 37866 AAGACCAATCGTTGCTGATCAGGAGGGATTCCTTCTTTGTCCTGAATCTTGGCCTTGACG 37925
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|| |||||||| || ||| ||||||||| || || | |||||||| || | || ||
Sbjct 37926 TTTTCAATGGTATCAGAAGCTTCCACTTCTAGAGTGATTGTCTTTCCCGTGAGGGTCTTC 37985
Query 195127 ACGAACACTTGCAT 195140
|| || | |||||
Sbjct 37986 ACAAAGATCTGCAT 37999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109109217756332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |