Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq13211 132 5e-26 seq8748 129 7e-25 seq1949 129 7e-25 seq6 123 3e-23 seq545 105 8e-18 seq865 96.9 4e-15 seq554 96.9 4e-15 seq668 95.1 1e-14 seq21 93.3 5e-14 >seq13211 Length=5644 Score = 132 bits (146), Expect = 5e-26 Identities = 282/427 (66%), Gaps = 43/427 (10%) Strand=Plus/Minus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || |||| | || ||||| Sbjct 4787 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTC 4728 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 4727 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 4668 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||||||||||||||| || |||||||||||||||| || | ||| ||| | Sbjct 4667 ACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACCAAATGA 4608 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174 ||| || ||| || | |||| || ||||||||||| || || || | Sbjct 4607 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 4548 Query 19175 ----CACATGGCATTGTCT---------CTAT-----AGAAT--------------TAAA 19202 | || ||||| | |||| | ||| |||| Sbjct 4547 TTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAATCTAAA 4488 Query 19203 TAGATACATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261 | | ||| || ||| || |||||||| ||| | ||| || ||| ||||||| Sbjct 4487 AAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTT 4428 Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCT 19321 |||||||||||||||| ||||| || |||||||| |||||||| | || |||| ||| | Sbjct 4427 CTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTT 4368 Query 19322 GTACTTC 19328 | ||||| Sbjct 4367 GAACTTC 4361 >seq8748 Length=9037 Score = 129 bits (142), Expect = 7e-25 Identities = 281/422 (67%), Gaps = 38/422 (9%) Strand=Plus/Minus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || || | | || ||||| Sbjct 8677 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 8618 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 8617 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 8558 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||| ||||||||||| || ||||| |||||||||| || | ||| ||| | Sbjct 8557 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACCAAATGA 8498 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174 ||| || ||| || | |||| || ||||||||||| || || || | Sbjct 8497 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 8438 Query 19175 ----CACATGGCATT----GTCT-----CTATAGAA--------TTAAAT----AGA--T 19207 | || ||||| || |||| || || ||| ||| Sbjct 8437 CTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTTTAATCTGAAGAAGG 8378 Query 19208 ACATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | ||| || ||| | |||||||| ||| | ||| || ||| |||||||||||| Sbjct 8377 AAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAA 8318 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 ||||||||||| ||||| || |||||||| |||||||| | ||||||| ||| || ||| Sbjct 8317 TGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAACT 8258 Query 19327 TC 19328 || Sbjct 8257 TC 8256 >seq1949 Length=26475 Score = 129 bits (142), Expect = 7e-25 Identities = 280/422 (66%), Gaps = 38/422 (9%) Strand=Plus/Minus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || || | | || ||||| Sbjct 12055 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 11996 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 11995 ATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 11936 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||| ||||||||||| || ||||| |||||||||| || | ||| ||| | Sbjct 11935 ACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAATGA 11876 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTA---------- 19174 ||| || ||| || | |||| || ||||||||||| || || || | Sbjct 11875 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATCAAA 11816 Query 19175 ----CACATGGCATT----GTCT-----CTAT----AGAAT----------TAAATAGAT 19207 | || ||||| || |||| | ||| |||| | Sbjct 11815 CTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTTAATCTAAAGAAGG 11756 Query 19208 ACATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 | ||| || ||| | |||||||| ||| | ||| || ||| |||||||||||| Sbjct 11755 AAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAA 11696 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 ||||||||||| ||||| || |||||||| |||||||| | ||||||| ||| || ||| Sbjct 11695 TGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAACT 11636 Query 19327 TC 19328 || Sbjct 11635 TC 11634 >seq6 Length=123133 Score = 123 bits (136), Expect = 3e-23 Identities = 278/420 (66%), Gaps = 36/420 (9%) Strand=Plus/Plus Query 18945 ATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTC 19004 ||||| || | ||||| |||||||| | ||| ||||| || || | | || ||||| Sbjct 115745 ATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAATTC 115804 Query 19005 ATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAA 19064 |||| ||| | |||||||| | || | ||| |||| ||| || || | |||||| Sbjct 115805 ATTACTTTGTGTCAGCCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAA 115864 Query 19065 TGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACT 19124 |||||| ||||||||||| || |||| |||||||||| || | ||| ||| | Sbjct 115865 ACTTCCAGAGAAGAATATACCCTCAACTGTGGCAAAAGCAATGAGACGTTCACCAAATGA 115924 Query 19125 AGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTT--------------T 19170 ||| || ||| || | |||| || ||||| ||||| || || Sbjct 115925 AGCTTCTTTACTAGCAGTCCAACGAAGAGCCCATTCAGCTTTTTTCTTGATAAAATCAAA 115984 Query 19171 TTTACACATGGCATT----GTCT-----CTAT---AGAAT---------TAAATAGATAC 19209 || | | || ||||| || |||| | ||| |||| | | Sbjct 115985 TTCAAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTAATCTAAAAAAGGAA 116044 Query 19210 ATA-CGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATG 19268 ||| || ||| | |||||||| ||| | ||| || ||| |||||||||||||| Sbjct 116045 ATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAATG 116104 Query 19269 AATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 ||||||||| ||||| || |||||||| |||||||| | ||||||| ||| || ||||| Sbjct 116105 AATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAACTTC 116164 >seq545 Length=42957 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| |||||||| | ||| ||||| || |||| | || ||||||||| ||| | Sbjct 28596 ACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAATTCATTACTTTGTGTCAG 28537 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 |||||||| || | ||| |||| ||| || || | |||||| |||||| ||||| Sbjct 28536 TCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCAAAACTTCCAGAGAAGAA 28477 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATG 19139 |||||| || || || |||||||||| || | ||| ||| | ||| || ||| || Sbjct 28476 TATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAATGAAGCTTCTTTACTAGC 28417 Query 19140 AATCCATTTCAGTGCCCAATCAGCCTTCTTTTT 19172 | |||| || ||||||||||| || || || Sbjct 28416 AGTCCAACGAAGAGCCCAATCAGCTTTTTTCTT 28384 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283 |||||||| ||| | ||| || ||| ||||||||||||||||||||||| ||||| Sbjct 28288 ATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGAATGAATATTTTCAATAGC 28229 Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTC 19328 || |||||||| |||||||| | || |||| ||| || ||||| Sbjct 28228 AATTTGAAATCCATAAAAACAACGAGCCTCTGGTATTTGAACTTC 28184 >seq865 Length=36480 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || || || | ||| ||| || |||||||||| Sbjct 30176 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 30235 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 30236 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 30295 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| |||| ||||||| | | ||| | | |||||| || ||||| || || Sbjct 30296 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 30355 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 30356 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 30412 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383 || |||||| |||||||| || || | ||| | ||| ||||| ||| || || || || Sbjct 30879 AACTTGAAAATCTCCAGAAAGAACACGACGACAATAAATATTCGATGTGTAAGGCTCAAT 30938 Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAA 47443 |||||| || || |||| |||||| || ||||| ||||||||||| | |||| ||| || Sbjct 30939 AGATTCGTTGTTACCAAGAATTTGTGCTGTTGAAGCTGTAGGCATTGGAGCAATTAACAA 30998 Query 47444 GCTATTTCTTACTCCATAT 47462 || || | || ||| || Sbjct 30999 ACTGTTGCGGACACCAAAT 31017 Score = 91.5 bits (100), Expect = 2e-13 Identities = 99/129 (77%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583 |||| | || | ||||||||| || | | |||||||| ||||| || | ||| || || Sbjct 31441 ATCAAACTGCAAAATTCCTTT-CTCAACAGGAGAACCTTTATAAGTCTCATATGGTCCAA 31499 Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || | | || | ||||||| ||||||||||||| |||||| ||||||||||| |||| Sbjct 31500 ATTGCTCTGCCAATTCACAAGAAGCTTCCAATGCACCATAATAGATTGTTTCAAAAATTT 31559 Query 47644 TTATGTTTA 47652 | |||||| Sbjct 31560 GTTTGTTTA 31568 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978 |||| | ||||| |||||||| || ||||| || | || ||||| ||||| | | || Sbjct 36198 TAAAAACCTTTTTCGTTTCTTTGTGCAGATTTGAAACAGCAATTCTGGCAGCAAGCAAAG 36257 Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038 |||||||||| |||| ||| ||| || | || | ||| || || || |||| |||| Sbjct 36258 CATAATCTGGGTGAACTGTAGTATTTGAAGCAGCCACTTCAGCCGCCAAATTATCCAATT 36317 Query 49039 CTTTAGTAGTTACACCTGTATATATTCCT 49067 | ||| ||||| || ||||| || ||| Sbjct 36318 CAACAGTTGTTACTCCAGTATAAATGCCT 36346 >seq554 Length=42686 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || ||||| | ||| ||| || |||||||||| Sbjct 10043 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 10102 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 10103 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 10162 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| |||| ||||||| | | || | | |||||| || ||||| || || Sbjct 10163 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 10222 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 10223 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 10279 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978 |||| | ||||| |||||||| || ||||| || | || ||||| ||||| | | || Sbjct 16338 TAAAAACCTTTTTCGTTTCTTTGTGCAGATTTGAAACAGCAATTCTGGCAGCAAGCAAAG 16397 Query 48979 CATAATCTGGATGAATTGTTGTACATGTACTAGATATTTCTGCTGCTAATATATCTAATT 49038 |||||||||| |||| ||| ||| || | || || ||| || || || |||| |||| Sbjct 16398 CATAATCTGGGTGAACTGTAGTATTTGAAGCAGCTACTTCAGCCGCCAAATTATCCAATT 16457 Query 49039 CTTTAGTAGTTACACCTGTATATATTCCT 49067 | ||| ||||| || ||||| || ||| Sbjct 16458 CAACAGTTGTTACTCCAGTATAAATGCCT 16486 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383 || |||||| || ||||| || |||| ||| | ||| ||||| ||| || || || || Sbjct 10754 AACTTGAAAATCGCCAGAAAGAACTCGACGACAATAAATATTCGATGTGTAAGGCTCAAT 10813 Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440 ||| || || || |||| |||||| || ||||| ||||||||||| | |||| ||| Sbjct 10814 AGACTCGTTGTTACCAAGAATTTGTGCTGTTGAAGCTGTAGGCATTGGAGCAATTAA 10870 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583 |||| | || | ||| ||||| || | | |||||||| ||||| || | ||| || || Sbjct 11384 ATCAAACTGCAAAATGCCTTT-CTCAACAGGAGAACCTTTATAAGTCTCATATGGTCCAA 11442 Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || | | ||| | || ||| ||||||||||||| |||||||||||||||||| |||| Sbjct 11443 ATTGCTCAGCCAACTCGCAAGAAGCTTCCAATGCACCATAATATATTGTTTCAAAAATTT 11502 Query 47644 TTATGTTTA 47652 | |||||| Sbjct 11503 GTTTGTTTA 11511 >seq668 Length=40291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 47525 ATCATATTGAAGAATTCCTTTACTTATC-GGAGAACCATTATATGTTTTATAAGGACCGT 47583 |||| | || | ||||||||| || | | |||||||| ||||| || | ||| || || Sbjct 25507 ATCAAACTGCAAAATTCCTTT-CTCAACTGGAGAACCTTTATAAGTCTCATATGGCCCAA 25565 Query 47584 ATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTT 47643 || | | ||| | |||||| ||||||||||||| |||||||||||||||||| |||| Sbjct 25566 ATTGCTCAGCCAACTCACAAGAAGCTTCCAATGCACCATAATATATTGTTTCAAAAATTT 25625 Query 47644 TTATGTTTA 47652 | |||||| Sbjct 25626 GTTTGTTTA 25634 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || ||||| | ||| ||| || |||||||||| Sbjct 24054 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 24113 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 24114 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 24173 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| ||| ||||||| | | || | | |||||| || ||||| || || Sbjct 24174 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 24233 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 24234 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 24290 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 47324 AATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTAT 47383 || |||||| || ||||| || |||| ||| | ||| ||||| ||| || || || || Sbjct 24849 AACTTGAAAATCGCCAGAAAGAACTCGACGACAATAAATATTCGATGTGTAAGGCTCGAT 24908 Query 47384 AGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440 ||| || || || |||| |||||| || ||||| ||||||||||| | |||| ||| Sbjct 24909 AGACTCGTTGTTACCAAGAATTTGGGCTGTTGAAGCTGTAGGCATTGGAGCAATTAA 24965 >seq21 Length=96658 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 47012 TGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACT 47071 ||| || ||||||||||| || || || | ||| ||| || |||||||||| Sbjct 32395 TGTACGCAAATAATACATTCCTGTTTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 32336 Query 47072 AGTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 || | ||| | ||| | || || | |||||| | ||| | ||||||||| || || || Sbjct 32335 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 32276 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 ||| | | ||| |||| ||||||| | | || | | |||||| || ||||| || || Sbjct 32275 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 32216 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGA---GATTAGTATTTTGAATAGATCCTCC 47245 ||| || | ||| || |||||||| | | | ||||||| | ||| ||||| Sbjct 32215 TTTGTATAAAGCTTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCC 32159 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 47525 ATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTA 47584 |||| | || | ||||||||| | |||||||| ||||| || | ||| || || | Sbjct 31180 ATCAAACTGCAAAATTCCTTTCTCCACTGGAGAACCTTTATAAGTCTCATATGGTCCAAA 31121 Query 47585 TAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTT 47644 | | | || | |||||| ||||||||||||| |||||| ||||||||||| |||| Sbjct 31120 TTGCTCGGCCAACTCACAAGAAGCTTCCAATGCACCATAATAGATTGTTTCAAAAATTTG 31061 Query 47645 TATGTTTA 47652 | |||||| Sbjct 31060 TTTGTTTA 31053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561924737473440