Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq7962 98.7 1e-15
seq263 98.7 1e-15
>seq7962
Length=9965
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 116728 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTGAAAGAAGAACTTAAACATTTTCA 116787
||||||||||| ||||| || | || |||| ||| ||||| ||||||||||
Sbjct 8030 TGGAATTGGAAAAAATAATTCTTTGCCATGGAGATTACCTAAAGAATATAAACATTTTAT 7971
Query 116788 AAATGTTACGACTTCTACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAA 116847
||| | || || | ||| || || | ||||| ||||||||| | |||||| ||||
Sbjct 7970 TAATTTAACAACAACAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGTAGAAA 7911
Query 116848 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 116901
| ||||| ||||||||| | |||| | |||||||| ||||| |||||||
Sbjct 7910 ATGTTGGGAAAGTATTCCTGAAAAATATCGTCCATTAAAGAATCGTTTAAATAT 7857
>seq263
Length=53554
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 116728 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTGAAAGAAGAACTTAAACATTTTCA 116787
||||||||||| ||||| || | || |||| ||| ||||| ||||||||||
Sbjct 30165 TGGAATTGGAAAGAATAATTCTTTGCCGTGGAGATTACCTAAAGAATATAAACATTTTAT 30106
Query 116788 AAATGTTACGACTTCTACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAA 116847
||| | || || | ||| || || | ||||| ||||||||| | |||||| ||||
Sbjct 30105 TAATTTAACAACAACAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGTAGAAA 30046
Query 116848 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 116901
| ||||| ||||||||| | |||| | |||||||| ||||| |||||||
Sbjct 30045 ATGTTGGGAAAGTATTCCTGAAAAATATCGTCCATTAAAGAATCGTTTAAATAT 29992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632282491280480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |