Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29] 26,196 sequences; 258,067,405 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq10756 95.1 1e-14 seq659 93.3 4e-14 seq20290 86.0 6e-12 seq5662 86.0 6e-12 seq3835 86.0 6e-12 seq865 86.0 6e-12 seq422 86.0 6e-12 seq18229 84.2 2e-11 seq16001 84.2 2e-11 seq12421 84.2 2e-11 seq91 84.2 2e-11 seq11515 82.4 7e-11 seq856 82.4 7e-11 >seq10756 Length=7202 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | ||||| ||||||| || ||||||||||| ||||| || || | Sbjct 4866 GATGCAGATTTTTGTCAAAACTTTAACCGGAAAGACTATTACGCTTGAAGTTGAGGCATC 4807 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || ||||| ||||| || || || || || || ||||| Sbjct 4806 CGACACGATTGAAAATGTTAAGGCCAAGATTCAAGATAAGGAGGGCATTCCACCGGATCA 4747 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 4746 ACAGCGTTTG 4737 >seq659 Length=40447 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || ||||| ||||| | Sbjct 38000 GATGCAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCTTC 37941 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || || ||||| || |||||||||||||| ||||| ||||| Sbjct 37940 TGATACCATTGAAAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATCCCTCCTGATCA 37881 Query 24823 ACAACGTTTGATCTTT 24838 ||||| ||| ||||| Sbjct 37880 GCAACGATTGGTCTTT 37865 >seq20290 Length=3127 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || ||||||| || ||||||||||| ||||| || || | Sbjct 657 GATGCAGATTTTTGTCAAGACTTTAACCGGAAAGACTATTACGCTTGAAGTTGAGGCGTC 716 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||| ||||| || || || || || || ||||| Sbjct 717 TGACACGATTGAAAATGTTAAGGCCAAGATTCAAGATAAGGAGGGCATTCCGCCGGATCA 776 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 777 ACAGCGTTTG 786 >seq5662 Length=13541 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || ||||||| || ||||||||||| ||||| || || | Sbjct 7185 GATGCAGATTTTTGTCAAGACTTTAACCGGAAAGACTATTACGCTTGAAGTTGAGGCGTC 7244 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||| ||||| || || || || || || ||||| Sbjct 7245 TGACACGATTGAAAATGTTAAGGCCAAGATTCAAGATAAGGAGGGCATTCCGCCGGATCA 7304 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 7305 ACAGCGTTTG 7314 >seq3835 Length=18222 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || ||||||| || ||||||||||| ||||| || || | Sbjct 17813 GATGCAGATTTTTGTCAAGACTTTAACCGGAAAGACTATTACGCTTGAAGTTGAGGCGTC 17872 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||| ||||| || || || || || || ||||| Sbjct 17873 TGACACGATTGAAAATGTTAAGGCCAAGATTCAAGATAAGGAGGGCATTCCGCCGGATCA 17932 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 17933 ACAGCGTTTG 17942 >seq865 Length=36480 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 138152 ATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTC 138211 |||||| || ||||| | ||||||| | ||||| || | || ||||||||||| Sbjct 30136 ATTTATTGACCGTAAATTGAATGGCATTGACAGCTGGCCGTGTACGCAAATAATACATTC 30195 Query 138212 CCGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 ||||||| | ||||||||||| || | | || || || || | | || || || | Sbjct 30196 CCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGAGGTAATTTTTGCATATGTTG 30255 Query 138272 GTTTCGCCAGAAATATG----TTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCA 138327 | | ||| |||||| || || |||||||| || ||||| |||| |||||||| Sbjct 30256 GAT----CAGCAATATGTAAATTTAAAGATTGACTTTGGTCGATAAAAGGAGCTCGATCA 30311 Query 138328 ATGGCCATGTTAATTAAATTTTTACTTTT--CATCTCCCACACGGTCTTGTATA 138379 | ||||| || || ||||| || | || ||||| || || ||||||| Sbjct 30312 ACTGCCATTTTGAT--AATTTCACGTTGTGGAATTTCCCAAACAGTTTTGTATA 30363 >seq422 Length=46818 Score = 86.0 bits (94), Expect = 6e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || ||||||| || ||||||||||| ||||| || || | Sbjct 44252 GATGCAGATTTTTGTCAAGACTTTAACCGGAAAGACTATTACGCTTGAAGTTGAGGCGTC 44311 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || || ||||| ||||| || || || || || || ||||| Sbjct 44312 TGACACGATTGAAAATGTTAAGGCCAAGATTCAAGATAAGGAGGGCATTCCGCCGGATCA 44371 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 44372 ACAGCGTTTG 44381 >seq18229 Length=3682 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| ||||||||||| ||||| || || || | Sbjct 1644 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 1703 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | ||| ||||| || ||||| ||||| || || || || ||||| Sbjct 1704 GATACCATTGAGAATGTTAAGGCAAAA-ATTCAAGATAAAGAGGGTATCCCGCCTGATCA 1762 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 1763 ACAGCGTTTG 1772 >seq16001 Length=4432 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| ||||||||||| ||||| || || || | Sbjct 1953 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 2012 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | ||| ||||| || ||||| ||||| || || || || ||||| Sbjct 2013 GATACCATTGAGAATGTTAAGGCAAAA-ATTCAAGATAAAGAGGGTATCCCGCCTGATCA 2071 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 2072 ACAGCGTTTG 2081 >seq12421 Length=6087 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| ||||||||||| ||||| || || || | Sbjct 970 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 1029 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | ||| ||||| || ||||| ||||| || || || || ||||| Sbjct 1030 GATACCATTGAGAATGTTAAGGCAAAA-ATTCAAGATAAAGAGGGTATCCCGCCTGATCA 1088 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 1089 ACAGCGTTTG 1098 >seq91 Length=67459 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || ||||| ||||||||||| ||||| || || || | Sbjct 15069 ATGCAGATTTTTGTAAAGACTCTCACCGGAAAAACTATTACTCTCGAGGTTGAGGCTTCT 15128 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | ||| ||||| || ||||| ||||| || || || || ||||| Sbjct 15129 GATACCATTGAGAATGTTAAGGCAAAA-ATTCAAGATAAAGAGGGTATCCCGCCTGATCA 15187 Query 24823 ACAACGTTTG 24832 ||| |||||| Sbjct 15188 ACAGCGTTTG 15197 >seq11515 Length=6677 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || ||||| ||||| | Sbjct 5549 GATGCAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACTCTAGAAGTGGAAGCGTC 5608 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || ||||| || |||||||||||||| ||||| ||||| Sbjct 5609 TGATACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCA 5668 Query 24823 ACAACGTTTG 24832 ||||| ||| Sbjct 5669 GCAACGATTG 5678 >seq856 Length=36659 Score = 82.4 bits (90), Expect = 7e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || ||||| ||||| | Sbjct 5276 GATGCAGATCTTTGTGAAGACCCTCACGGGAAAGACAATCACCCTAGAAGTGGAAGCGTC 5335 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || ||||| || |||||||||||||| ||||| ||||| Sbjct 5336 TGATACCATTGAGAACGTCAAGGCCAAGATTCAGGACAAAGAAGGAATTCCTCCTGATCA 5395 Query 24823 ACAACGTTTG 24832 ||||| ||| Sbjct 5396 GCAACGATTG 5405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449750281030880