Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq7962 93.3 5e-14
seq263 93.3 5e-14
>seq7962
Length=9965
Score = 93.3 bits (102), Expect = 5e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 116911 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTGAAAGAAGAACTTAAACATTTTCA 116970
||||||||||| ||||| || | || |||| ||| ||||| ||||||||||
Sbjct 8030 TGGAATTGGAAAAAATAATTCTTTGCCATGGAGATTACCTAAAGAATATAAACATTTTAT 7971
Query 116971 AGATGTTACGACTTCTACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAA 117030
|| | || || | ||| || || | ||||| ||||||||| | |||||| ||||
Sbjct 7970 TAATTTAACAACAACAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGTAGAAA 7911
Query 117031 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 117084
| ||||| ||||||||| | |||| | |||||||| ||||| |||||||
Sbjct 7910 ATGTTGGGAAAGTATTCCTGAAAAATATCGTCCATTAAAGAATCGTTTAAATAT 7857
>seq263
Length=53554
Score = 93.3 bits (102), Expect = 5e-14
Identities = 125/174 (72%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 116911 TGGAATTGGAAGTAATAACACTCTTCCTTGGAAATTGAAAGAAGAACTTAAACATTTTCA 116970
||||||||||| ||||| || | || |||| ||| ||||| ||||||||||
Sbjct 30165 TGGAATTGGAAAGAATAATTCTTTGCCGTGGAGATTACCTAAAGAATATAAACATTTTAT 30106
Query 116971 AGATGTTACGACTTCTACTCAAGATAGTAGTaaaaaaaaTGCTGTTATTATGGGTCGAAA 117030
|| | || || | ||| || || | ||||| ||||||||| | |||||| ||||
Sbjct 30105 TAATTTAACAACAACAACTAAAAATCCAAATAAAATTAATGCTGTTTTGATGGGTAGAAA 30046
Query 117031 AACATGGGATAGTATTCCTAATAAATTTAAACCATTAAAAAATCGAATAAATAT 117084
| ||||| ||||||||| | |||| | |||||||| ||||| |||||||
Sbjct 30045 ATGTTGGGAAAGTATTCCTGAAAAATATCGTCCATTAAAGAATCGTTTAAATAT 29992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628325387458560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |