Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq554 138 2e-27
seq865 134 2e-26
seq668 129 8e-25
seq13211 125 1e-23
seq1949 125 1e-23
seq8748 122 1e-22
seq21 116 5e-21
seq6 107 3e-18
seq545 96.9 5e-15
seq261 89.7 7e-13
>seq554
Length=42686
Score = 138 bits (152), Expect = 2e-27
Identities = 205/288 (71%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||||||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 15020 TTATTTCCTCCCTGATCAATATAGCGTGCCACAG-AATTAAAAACTTGCAACATTGGAAT 15078
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 15079 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 15138
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
||| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| ||
Sbjct 15139 AATTGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 15198
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 15199 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 15258
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 15259 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 15306
Score = 102 bits (112), Expect = 1e-16
Identities = 189/275 (69%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || || || ||||| ||| | ||||||||||
Sbjct 10043 TGTACGCAAATAATACATCCCTGTCTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 10102
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 10103 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 10162
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| ||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 10163 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 10222
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 10223 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 10280
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 10281 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 10315
Score = 95.1 bits (104), Expect = 2e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||| ||| |||| ||||| ||||||||| |||||||| |||||||||||| |||||
Sbjct 13659 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTAGGACATTCATTCGGACA 13718
Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
||| || ||||| | |||||||| | ||||| ||||||||
Sbjct 13719 CATTAAAGACCAAATGTCATCATCTCTCACTCGCTTCATAAA 13760
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || |||||||||||||||||||| || | || || ||| |||
Sbjct 15709 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 15768
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202
||| ||| ||||| ||| ||| || |||||||| |||||||| | || || ||| ||
Sbjct 15769 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 15827
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232
| || |||||||| || ||||| |||||
Sbjct 15828 ACGATCATAAATAATTACTGAATTGAGTTT 15857
>seq865
Length=36480
Score = 134 bits (148), Expect = 2e-26
Identities = 204/288 (71%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||||||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 34578 TTATTTCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 34636
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 34637 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 34696
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
||| || || || |||||||| ||| ||| || || ||||||||| || | ||| ||
Sbjct 34697 AATGGAAAGTCCAATTCCTCCAGCCGATTTTGAAATATAAGCACAACGATTAATTGTTTC 34756
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 34757 AAAAATTCCTTCAATTGAATCGCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 34816
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 34817 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 34864
Score = 114 bits (126), Expect = 2e-20
Identities = 192/275 (70%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || ||||||||||| ||| | ||||||||||
Sbjct 30176 TGTACGCAAATAATACATTCCCGTTTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 30235
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 30236 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 30295
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| ||| | |||||||| ||||| ||| ||||||||||||| |||
Sbjct 30296 AAAAGGAGCTCGATCAACTGCCATTTTGATAATTTCACGTTGTGGAATTTCCCAAACAGT 30355
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 30356 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 30413
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 30414 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 30448
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || |||||||||||||||||||| || | || || ||| |||
Sbjct 35270 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 35329
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202
||| ||| ||||| ||| ||| || |||||||| |||||||| | || || ||| ||
Sbjct 35330 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGGAAA-TC 35388
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232
| || |||||||| || ||||| |||||
Sbjct 35389 ACGATCATAAATAATTACTGAATTGAGTTT 35418
>seq668
Length=40291
Score = 129 bits (142), Expect = 8e-25
Identities = 203/288 (70%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||| ||||||||||| || || | || || | |||| | ||| || ||| |||||
Sbjct 28603 TTATTCCCTCCCTGATCAATATAGCGTGCCACCG-AATTAAAAACTTGCAACATTGGAAT 28661
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 28662 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 28721
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
|| || || || |||||||| ||| ||| ||||| ||||||||| || | ||| ||
Sbjct 28722 GATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAACGATTTATTGTTTC 28781
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| ||| | ||| |
Sbjct 28782 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAAGAAAGTTGTGG 28841
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 28842 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 28889
Score = 111 bits (122), Expect = 2e-19
Identities = 191/275 (69%), Gaps = 7/275 (3%)
Strand=Plus/Plus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || || |||||||| ||| | ||||||||||
Sbjct 24054 TGTACGCAAATAATACATCCCCGTCTTCAGACCATTTTCCCAAGCAAAGAAATGCATTGA 24113
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 24114 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 24173
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| |||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 24174 AAAAGGAGCTCGATCTACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 24233
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 24234 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 24291
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 24292 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 24326
Score = 96.9 bits (106), Expect = 5e-15
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || |||||||||||||||||||| || | || || ||| |||
Sbjct 29103 TGTATTCCAACAGCAACACGCATCAACATATGCTGTGGCCTCTCAACTACTTTTCCATTG 29162
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA-TGAAAAGTC 70202
||| ||| ||||| ||| ||| || |||||||| |||||||| | || |||||| ||
Sbjct 29163 ATTCGCAAAAGGTAAGATCGTTCAAGTGTTTTAAAGCCAAAATAAGTATAGTGAAAA-TC 29221
Query 70203 TCTTTCGTAAATAATAACAGAATTTAGTTT 70232
| || ||||||||||| ||||| |||||
Sbjct 29222 ACGATCATAAATAATAACTGAATTGAGTTT 29251
Score = 86.0 bits (94), Expect = 9e-12
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||| ||| |||| ||||| ||||||||| |||||||| ||||||||||| |||||
Sbjct 27288 ATAAAGCTGTTCAAATTCCTCTCCCCAACACTCATCCAAGTTGGGACATTCATTCGGACA 27347
Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
||| || ||||| | |||||||| | || || ||||||||
Sbjct 27348 CATTAAAGACCAAATGTCATCATCTCTCACACGCTTCATAAA 27389
>seq13211
Length=5644
Score = 125 bits (138), Expect = 1e-23
Identities = 289/440 (66%), Gaps = 49/440 (11%)
Strand=Plus/Minus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||||| | |||||||
Sbjct 4789 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAAT 4730
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 4729 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 4670
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||||||||| || || || ||||||||||| |||| || | || ||
Sbjct 4669 AAACTTCCAGAAAAGAATATACCCTCAACTGCTGCAAAAGCAATGAGACGTTCACCAAAT 4610
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 4609 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 4551
Query 39835 CATTGTTTCTATAGCATTAAAGA-----GA---------------TAATGTTTTTCATC- 39873
| | |||||||||||| | || | || ||||| |||
Sbjct 4550 AAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAATTTATTTTTTTAATCT 4491
Query 39874 ------------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACA 39911
|| |||||||| ||| ||||| ||||| |||||
Sbjct 4490 AAAAAAGGAAATACCGTTCAATTGGATCTTTAATATAAGTATCAATTAATTTTGAATACA 4431
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
|||||||||| || |||||||| || || |||||||| |||||||| | || || | |
Sbjct 4430 TTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGTA 4371
Query 39972 TTTGTACCTC-TGAACAAAA 39990
|||| || || ||| |||||
Sbjct 4370 TTTGAACTTCTTGAGCAAAA 4351
>seq1949
Length=26475
Score = 125 bits (138), Expect = 1e-23
Identities = 286/435 (66%), Gaps = 44/435 (10%)
Strand=Plus/Minus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 12057 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 11998
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 11997 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 11938
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||| ||||| || || || ||||| ||||| |||| ||| | || ||
Sbjct 11937 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATAAGACGTTCACCAAAT 11878
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 11877 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 11819
Query 39835 CATTGTTTCTATAGCATTAAA---------------GAGATAATGTTTTTCATC------ 39873
| |||||||||||| | | ||| ||||| |||
Sbjct 11818 AAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAAATTTTTTTAATCTAAAGA 11759
Query 39874 -------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACATTTCT 39916
|| |||||||| ||| ||||| ||||| ||||||||||
Sbjct 11758 AGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCT 11699
Query 39917 GAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGT 39976
||||| || |||||||| || || |||||||| |||||||| | ||||| | |||||
Sbjct 11698 GAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGA 11639
Query 39977 ACCTC-TGAACAAAA 39990
|| || ||| |||||
Sbjct 11638 ACTTCTTGAGCAAAA 11624
>seq8748
Length=9037
Score = 122 bits (134), Expect = 1e-22
Identities = 287/435 (66%), Gaps = 44/435 (10%)
Strand=Plus/Minus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 8679 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 8620
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 8619 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 8560
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||| ||||| || || || ||||| ||||| |||| || | || ||
Sbjct 8559 AAACTTCCAGAGAAGAATATACCCTCAACTGCGGCAAAAGCAATGAGACGTTCACCAAAT 8500
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 8499 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 8441
Query 39835 CATTGTTTCTATAGCATTAAAGA-----GA-----TAA-----TGTTTTTCATC------ 39873
| |||||||||||| | || ||| | ||||| |||
Sbjct 8440 AAACTCGAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTTTAATCTGAAGA 8381
Query 39874 -------AC----------TATCTTTAACATATGTATCTATTAACAGACTATACATTTCT 39916
|| |||||||| ||| ||||| ||||| ||||||||||
Sbjct 8380 AGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCT 8321
Query 39917 GAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGT 39976
||||| || |||||||| || || |||||||| |||||||| | ||||| | |||||
Sbjct 8320 GAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGA 8261
Query 39977 ACCTC-TGAACAAAA 39990
|| || ||| |||||
Sbjct 8260 ACTTCTTGAGCAAAA 8246
>seq21
Length=96658
Score = 116 bits (128), Expect = 5e-21
Identities = 200/288 (69%), Gaps = 2/288 (1%)
Strand=Plus/Minus
Query 69745 TTATTTCCTCCCTGATCTATGTATC-TGGCAGTGTTATTATAGACTCTCAGCATCGGAAT 69803
||||| ||||||||||| || || | || || | |||| | ||| | ||| |||||
Sbjct 28139 TTATTCCCTCCCTGATCAATATAGCGTGCCACCGA-ATTAAAAACTTGTAACATTGGAAT 28081
Query 69804 AATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACT 69863
||| ||||| || || |||||||||||||| || || ||| || ||||| |
Sbjct 28080 AATTCCATTCGAATTTCCATTTGTTCCAGAGATCAAAGAACCTGAAGCACGAATTGAATG 28021
Query 69864 AATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTC 69923
||| || || || |||||||| ||| ||| ||||| |||||| || || | ||| ||
Sbjct 28020 AATGGAAAGTCCAATTCCTCCAGCCGATTTTGAGATATAAGCACAGCGATTAATTGTTTC 27961
Query 69924 ATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATG 69983
| | || || || || ||| | | ||| ||| | |||||| || | || |
Sbjct 27960 AAAAATTCCTTCAATTGAATCTCCAACCATTGAAAGCAAAAAACAAGAGGAAAGCTGTGG 27901
Query 69984 ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCA 70031
| || | || ||||| || ||||| || ||||| |||||||| |||||
Sbjct 27900 ACGTTTTGTACCCGCGTTGAATAAAGTTGGAGAGGCGTGAGTAAACCA 27853
Score = 105 bits (116), Expect = 9e-18
Identities = 190/275 (69%), Gaps = 7/275 (3%)
Strand=Plus/Minus
Query 68403 TGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACT 68462
|||||| | ||| ||||| || ||||| ||||| ||| | ||||||||||
Sbjct 32395 TGTACGCAAATAATACATTCCTGTTTTAAGACCATTTTCCCAAGCAAAGAAATGCATTGA 32336
Query 68463 TGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGAT 68522
|| | ||| | ||| ||||||| || ||||| | ||| | ||||||||||| |||||
Sbjct 32335 GGTAATTTTTGCATATGTTGGATCAGCAATATGTAAATTTAAAGATTGACTTTGGTCGAT 32276
Query 68523 GAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGT 68582
|||| ||| ||| | |||||||| || || ||| ||||||||||||| |||
Sbjct 32275 AAAAGGAGCTCGATCAACTGCCATTTTGATGATTTCACGTTGTGGAATTTCCCAAACAGT 32216
Query 68583 CT--TAAAAATCTGTTTGATATCATCTGGAAGGC---TCGTATTTTGAATGGATCCACCA 68637
| || ||| | ||||||||| ||||| | | ||||||| | || || |||
Sbjct 32215 TTTGTATAAAGC--TTTGATATCTTCTGGCAATCCAACAATATTTTGGACAGAACCTCCA 32158
Query 68638 TCGGATATAATTATATTCTTGATCTCATCATTCCA 68672
|| ||||| | |||||| || | |||| |||
Sbjct 32157 TCAGATATTAAACGATTCTTCATTTGGTCATCCCA 32123
Score = 84.2 bits (92), Expect = 3e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 69104 CCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAG 69163
|||| || ||||| || || || | ||||| |||||||| |||||||| ||||| ||
Sbjct 30637 CCTGTACACCAATTCCAATTGGACGATGTCGAAGATTTGAACGTTCAGCTTGTGGAACAG 30578
Query 69164 GATAATAATTAATATCTATAATTTTATTAAGATTTC 69199
|||||||||| ||||| || ||||| || | |||||
Sbjct 30577 GATAATAATTTATATCAATTATTTTGTTCAAATTTC 30542
>seq6
Length=123133
Score = 107 bits (118), Expect = 3e-18
Identities = 276/424 (65%), Gaps = 41/424 (10%)
Strand=Plus/Plus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 115743 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 115802
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| || |||||||| | ||| || || || |||||||| || ||||||
Sbjct 115803 TCATTACTTTGTGTCAGCCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 115862
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||| ||||| || || || |||| ||||| |||| || | || ||
Sbjct 115863 AAACTTCCAGAGAAGAATATACCCTCAACTGTGGCAAAAGCAATGAGACGTTCACCAAAT 115922
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | ||||| |||||||| ||||| | | ||
Sbjct 115923 GAAGCTTCTTT-ACTAGCAGTCCAACGAAGAGCCCATTCAGCTTTTTTCTTGATAAAATC 115981
Query 39835 CATTGTTTCTATAGCATTAAAGAGAT--------------AATGTTTT----TCA----- 39871
| | |||||||||||| | | ||| |||| | |
Sbjct 115982 AAATTCAAATATAGCATTAAACAACTTTGAACTATTAAAAAATTTTTTAATCTAAAAAAG 116041
Query 39872 ----------TCACT---ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918
||| | |||||||| ||| ||||| ||||| ||||||||||||
Sbjct 116042 GAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATACATTTCTGA 116101
Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978
||| || |||||||| || || |||||||| |||||||| | ||||| | ||||| ||
Sbjct 116102 ATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCTTCTGGTATTTGAAC 116161
Query 39979 CTCT 39982
|||
Sbjct 116162 TTCT 116165
>seq545
Length=42957
Score = 96.9 bits (106), Expect = 5e-15
Identities = 282/441 (64%), Gaps = 50/441 (11%)
Strand=Plus/Minus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||| | || | || || || || || | ||| || || ||||||| | |||||||
Sbjct 28613 AAATGCTGGAAAAGTAGACAAGCAAAATCTCGATGAAGTCCTTCATCTCGAGAAATTAAT 28554
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| ||| || || || |||||||| || ||||||
Sbjct 28553 TCATTACTTTGTGTCAGTCCAGGCATATAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 28494
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC---- 39774
||| |||||| ||||| || || || || || ||||| |||| || | || ||
Sbjct 28493 AAACTTCCAGAGAAGAATATACCCTCAACCGCGGCAAAAGCAATGAGACGTTCACCAAAT 28434
Query 39775 GTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834
| | ||| | | | || |||| | |||||||||||||| ||||| | | ||
Sbjct 28433 GAAGCTTCT-TTACTAGCAGTCCAACGAAGAGCCCAATCAGCTTTTTTCTTGATAAAATC 28375
Query 39835 CATTGTTTCTATAGCATT--------------------AAAGAGATAATGTTTTTCA--- 39871
| | ||||||||| ||| | ||| | ||||| |
Sbjct 28374 AAATTCGAATATAGCATTAAATAACTTTGAACTATTAAAAAAAAATATTTTTTTTTAATT 28315
Query 39872 ------------------TCACT---ATCTTTAACATATGTATCTATTAACAGACTATAC 39910
||| | |||||||| ||| ||||| ||||| ||||
Sbjct 28314 TAAAGAAGGAAATACCGTTCAATCGGATCTTTAATATAAGTATCAATTAATTTTGAATAC 28255
Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970
||||||||||| || |||||||| || || |||||||| |||||||| | || || |
Sbjct 28254 ATTTCTGAATGAATATTTTCAATAGCAATTTGAAATCCATAAAAACAACGAGCCTCTGGT 28195
Query 39971 ATTTGTACCTC-TGAACAAAA 39990
||||| || || ||| |||||
Sbjct 28194 ATTTGAACTTCTTGAGCAAAA 28174
>seq261
Length=53585
Score = 89.7 bits (98), Expect = 7e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 39599 AAATGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAAT 39658
||||||| || | ||| || || || || | ||| || || ||||| | | |||||||
Sbjct 49141 AAATGTTGGAAAAGTAAACAAGCAAAATCTCGATGAAGTCCTTCATCACGAGAAATTAAT 49200
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
|| ||| ||| ||||||||||| | ||| || || || |||||||| || ||||||
Sbjct 49201 TCATTACTTTGTGTCAGTCCAGGCATAAAACCGCGTTTCTTTAGCCAAAAAATTGCAGCA 49260
Query 39719 AAAGATCCAGAAAAGAA 39735
||| |||||| |||||
Sbjct 49261 AAACTTCCAGAGAAGAA 49277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686683871713440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |