Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Meloidogyne_20arenaria_20[genbank_20GCA_5F900003985.1_202017-04-29]
26,196 sequences; 258,067,405 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq5477 86.0 8e-12
>seq5477
Length=13945
Score = 86.0 bits (94), Expect = 8e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTT-TCGCGGGCGATTTCAAAGAG 11688
||||||||||||||||| || | |||||| || |||||| | || || ||||| || |
Sbjct 2086 GCATCAATCTCATCAATAAAAAGAATACAAGG-TGATTTCTTTCGTGCCATTTCGAACAT 2144
Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAG-AGC 11747
||| | || | | || || ||||||||||||||||| | || | || | ||| | |
Sbjct 2145 ATCCCTCACACGTCCGGGGCCAACACCAACAAACATCTCAAGGAATTCTGAGCCAGAAAC 2204
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
| | |||||| || ||||| | || || || | ||| ||| || | || || || |
Sbjct 2205 AGT-GATGAAAGGTACATTAGCCTCTCCTGCCGTTGCTTTGGCAAGTAAAGTTTTGCCAG 2263
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCC 11835
| ||||| ||| | |||||| || ||
Sbjct 2264 TTCCTGGTGGACCAGTGAGAAGAGCACC 2291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627826350921600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |